Edinburgh Research Explorer

A mini-atlas of gene expression for the domestic goat

Dataset

Related Edinburgh Organisations

PublisherEdinburgh DataShare
Date made available24 Jul 2019
Geographical coverageUK,UNITED KINGDOM

Abstract

The goat mini-atlas dataset includes 54 mRNA-Seq (poly-A selected) 75bp paired-end libraries from 20 tissues and 2 cell types from neonatal crossbred dairy goats. Gene level expression estimates, for the goat mini-atlas, are provided as unaveraged (S2 Dataset) and averaged across biological replicates (S3 Dataset) files. For each tissue a set of gene expression estimates, as transcripts per million (TPM), were obtained using the transcript quantification tool Kallisto.

Data Citation

Muriuki, Charity; Bush, Stephen J; Salavati, Mazdak; McCulloch, Mary EB; Lisowski, Zofia M; Agaba, Morris; Djikeng, Appolinaire; Hume, David A; Clark, Emily L. (2019). A mini-atlas of gene expression for the domestic goat, [dataset]. University of Edinburgh. The Roslin Institute. https://doi.org/10.7488/ds/2591.

ID: 105774885