Edinburgh Research Explorer

Mobius Assembly: a versatile Golden-Gate framework towards universal DNA assembly

Dataset

Related Edinburgh Organisations

PublisherEdinburgh DataShare
Date made available28 Nov 2017

Abstract

Golden Gate Assembly technology, with its robust capability to unidirectionally assemble numerous DNA fragments in a one-tube reaction, has the potential to deliver a universal standard framework for DNA assembly. While current Golden Gate Assembly frameworks (e.g. MoClo and Golden Braid) render either high cloning capacity or vector toolkit simplicity, the technology can be made more versatile – simple, streamlined, and cost/labor-efficient, without compromising capacity. Here we report the development of a new Golden Gate Assembly framework named Mobius Assembly, which combines vector toolkit simplicity with high cloning capacity. It is based on a two-level, hierarchical approach and utilizes a low-frequency cutter to reduce domestication requirements. Mobius Assembly embraces the standard overhang designs designated by MoClo, Golden Braid, and Phytobricks and is largely compatible with already available Golden Gate part libraries. In addition, dropout cassettes encoding chromogenic proteins were implemented for cost-free visible cloning screening that color-code different cloning levels. As proofs of concept, we have successfully assembled up to 16 transcriptional units of various pigmentation genes in both operon and multigene arrangements. Taken together, Mobius Assembly delivers enhanced versatility and efficiency in DNA assembly, facilitating improved standardization and automation.

Data Citation

Andreou, Andreas; Nakayama, Naomi. (2017). Mobius Assembly: a versatile Golden-Gate framework towards universal DNA assembly, [dataset]. University of Edinburgh. School of Biological Sciences. Institute of Molecular Plant Sciences, Centre for Synthetic and Systems Biology, Centre for Science at Extreme Conditions. http://dx.doi.org/10.7488/ds/2261.

ID: 50055663