Edinburgh Research Explorer

Centre for Genomic and Experimental Medicine

Organisational unit: Research Centre

  1. Chapter (peer-reviewed) › Research › Peer-reviewed
  2. Adhesion molecules in bone remodelling

    Hughes, D. E. & Salter, D., 16 May 1997, Adhesion Molecules in Health and Disease. Paul, L. & Issekutz, T. (eds.). Marcel Dekker Inc., p. 427-444

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  3. Connective Tissue Responses to Mechanical Stresses

    Salter, D., 8 Nov 2010, Rheumatology. Hochberg, M., Silman, A., Smolen, J., Weinblatt, M. & Weisman, M. (eds.). 5 ed. Elsevier - Health Sciences Division

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  4. Connective Tissue Responses to Mechanical Stresses

    Salter, D., 13 Jun 2014, Rheumatology. Hochberg, M. C., Silman, A. J., Smolen, J. S., Weinblatt, M. & Weisman, M. (eds.). 6 ed. Elsevier - Health Sciences Division

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  5. Data integration in eHealth: a domain/disease specific roadmap

    Ure, J., Procter, R., Martone, M., Porteous, D., Lloyd, S., Lawrie, S., Job, D., Baldock, R., Philp, A., Liewald, D., Rakebrandt, F., Blaikie, A., McKay, C., Anderson, S., Ainsworth, J., van Hemert, J., Blanquer, I., Sinnott, R., Barillot, C., Gibaud, F. B. & 17 others, Williams, A., Hartswood, M., Watson, P., Smith, L., Burger, A., Kennedy, J., Gonzalez-Velez, H., Stevens, R., Corcho, O., Morton, R., Linksted, P., Deschenes, M., McGilchrist, M., Johnson, P., Voss, A., Gertz, R. & Wardlaw, J., 2007, From Genes to Personalized HealthCare: Grid Solutions for the Life Sciences. Vol. 126. p. 144-53 10 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  6. Disease-associated sequence variations in factor H: A structural biology approach

    Herbert, A. P., Soares, D. C., Pangburn, M. K. & Barlow, P. N., 2006, Current Topics in Complement. Springer-Verlag GmbH, Vol. 586. p. 313-327 15 p. (Advances in Experimental Medicine and Biology ).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  7. Genetics of Paget's disease of bone

    Albagha, O., 2013, Genetics of bone biology and skeletal disease. USA: Academic Press, p. 295-308

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  8. Optimisation of quantitative real-time PCR conditions for studies in cartilage mechanobiology

    Salter, D. & Chowdhury, T., 2 Nov 2010, 3D Cell Culture Methods and Protocols . Haycock, J. (ed.). 1 ed. HUMANA PRESS INC, Vol. 695. (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  9. Pathology and Pathogenesis of Osteoarthritis

    Aigner, T., Schmitz, N. & Salter, D., 13 Jun 2014, Rheumatology . Hochberg, M., Silman, A., Smolen, J., Weinblatt, M. & Weisman, M. (eds.). 6 ed. Elsevier - Health Sciences Division

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  10. The impact of mechanical stress on the pathophysiology of Osteoarthritis.

    Nuki, G. & Salter, D., 2007, Osteoarthritis : A Companion to Rheumatology . Sharma, L. & Berenbaum, F. (eds.). Elsevier Health Sciences

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  11. Paper › Research › Not peer-reviewed
  12. Prediction of major depressive disorder within the Generation Scotland cohort

    Bermingham, M., 30 Oct 2015, (Unpublished).

    Research output: Contribution to conferencePaper

  13. Paper › Research › Peer-reviewed
  14. Effect of missing data and sample size on the performance of genotype-environment association methods

    Xuereb, A., Stahlke, A., Bermingham, M., Brown, M., Nonaka, E., Razgour, O., Pavinato, V., Andrews, K. R., Joost, S., Landguth, E. L., Manel, S. & Forester, B. R., 12 Apr 2017.

    Research output: Contribution to conferencePaper

  15. Machine learning can improve prediction of depression in Generation Scotland

    Bermingham, M., 23 Nov 2015.

    Research output: Contribution to conferencePaper

  16. Poster › Research › Not peer-reviewed
  17. Poster › Research › Peer-reviewed
  18. Abstract › Research › Peer-reviewed
  19. QuPath: Digital Pathology for Everyone

    Bankhead, P., 2019, (Unpublished).

    Research output: Contribution to conferenceAbstract

  20. Other › Research › Not peer-reviewed
  21. Other › Research › Peer-reviewed
  22. Characterisation of atherosclerotic plaque by spectral analysis of 30 MHz intravascular ultrasound radio frequency data

    Spencer, T., Ramo, M. P., Salter, D., Sutherland, G., Fox, K. A. & Mcdicken, W. N., 1997, p. 1073-1076.

    Research output: Contribution to conferenceOther

  23. Article › Research › Not peer-reviewed
  24. Author Correction: Study of 300,486 individuals identifies 148 independent genetic loci influencing general cognitive function

    Davies, G., Lam, M., Harris, S. E., Trampush, J. W., Luciano, M., Hill, W. D., Hagenaars, S. P., Ritchie, S. J., Marioni, R. E., Fawns-Ritchie, C., Liewald, D. C. M., Okely, J. A., Ahola-Olli, A. V., Barnes, C. L. K., Bertram, L., Bis, J. C., Burdick, K. E., Christoforou, A., DeRosse, P., Djurovic, S. & 202 others, Espeseth, T., Giakoumaki, S., Giddaluru, S., Gustavson, D. E., Hayward, C., Hofer, E., Ikram, M. A., Karlsson, R., Knowles, E., Lahti, J., Leber, M., Li, S., Mather, K. A., Melle, I., Morris, D., Oldmeadow, C., Palviainen, T., Payton, A., Pazoki, R., Petrovic, K., Reynolds, C. A., Sargurupremraj, M., Scholz, M., Smith, J. A., Smith, A. V., Terzikhan, N., Thalamuthu, A., Trompet, S., van der Lee, S. J., Ware, E. B., Windham, B. G., Wright, M. J., Yang, J., Yu, J., Ames, D., Amin, N., Amouyel, P., Andreassen, O. A., Armstrong, N. J., Assareh, A. A., Attia, J. R., Attix, D., Avramopoulos, D., Bennett, D. A., Böhmer, A. C., Boyle, P. A., Brodaty, H., Campbell, H., Cannon, T. D., Cirulli, E. T., Congdon, E., Conley, E. D., Corley, J., Cox, S. R., Dale, A. M., Dehghan, A., Dick, D., Dickinson, D., Eriksson, J. G., Evangelou, E., Faul, J. D., Ford, I., Freimer, N. A., Gao, H., Giegling, I., Gillespie, N. A., Gordon, S. D., Gottesman, R. F., Griswold, M. E., Gudnason, V., Harris, T. B., Hartmann, A. M., Hatzimanolis, A., Heiss, G., Holliday, E. G., Joshi, P. K., Kähönen, M., Kardia, S. L. R., Karlsson, I., Kleineidam, L., Knopman, D. S., Kochan, N. A., Konte, B., Kwok, J. B., Le Hellard, S., Lee, T., Lehtimäki, T., Li, S-C., Lill, C. M., Liu, T., Koini, M., London, E., Longstreth, W. T., Lopez, O. L., Loukola, A., Luck, T., Lundervold, A. J., Lundquist, A., Lyytikäinen, L-P., Martin, N. G., Montgomery, G. W., Murray, A. D., Need, A. C., Noordam, R., Nyberg, L., Ollier, W., Papenberg, G., Pattie, A., Polasek, O., Poldrack, R. A., Psaty, B. M., Reppermund, S., Riedel-Heller, S. G., Rose, R. J., Rotter, J. I., Roussos, P., Rovio, S. P., Saba, Y., Sabb, F. W., Sachdev, P. S., Satizabal, C. L., Schmid, M., Scott, R. J., Scult, M. A., Simino, J., Slagboom, P. E., Smyrnis, N., Soumaré, A., Stefanis, N. C., Stott, D. J., Straub, R. E., Sundet, K., Taylor, A. M., Taylor, K. D., Tzoulaki, I., Tzourio, C., Uitterlinden, A., Vitart, V., Voineskos, A. N., Kaprio, J., Wagner, M., Wagner, H., Weinhold, L., Wen, K. H., Widen, E., Yang, Q., Zhao, W., Adams, H. H. H., Arking, D. E., Bilder, R. M., Bitsios, P., Boerwinkle, E., Chiba-Falek, O., Corvin, A., De Jager, P. L., Debette, S., Donohoe, G., Elliott, P., Fitzpatrick, A. L., Gill, M., Glahn, D. C., Hägg, S., Hansell, N. K., Hariri, A. R., Ikram, M. K., Jukema, J. W., Vuoksimaa, E., Keller, M. C., Kremen, W. S., Launer, L., Lindenberger, U., Palotie, A., Pedersen, N. L., Pendleton, N., Porteous, D. J., Räikkönen, K., Raitakari, O. T., Ramirez, A., Reinvang, I., Rudan, I., Dan Rujescu, Schmidt, R., Schmidt, H., Schofield, P. W., Schofield, P. R., Starr, J. M., Steen, V. M., Trollor, J. N., Turner, S. T., Van Duijn, C. M., Villringer, A., Weinberger, D. R., Weir, D. R., Wilson, J. F., Malhotra, A., McIntosh, A. M., Gale, C. R., Seshadri, S., Mosley, T. H., Bressler, J., Lencz, T. & Deary, I. J., 1 May 2019, In : Nature Communications. 10, 1, p. 2068

    Research output: Contribution to journalArticle

  25. Cohort profile for the STratifying Resilience and Depression Longitudinally (STRADL) study: A depression-focused investigation of Generation Scotland, using detailed clinical, cognitive, and neuroimaging assessments

    Habota, T., Sandu, A., Waiter, G. D., Mcneil, C. J., Steele, J. D., Macfarlane, J. A., Whalley, H. C., Valentine, R., Younie, D., Crouch, N., Hawkins, E. L., Hirose, Y., Romaniuk, L., Milburn, K., Buchan, G., Coupar, T., Stirling, M., Jagpal, B., Maclennan, B., Priba, L. & 20 others, Harris, M. A., Hafferty, J. D., Adams, M. J., Campbell, A. I., Macintyre, D. J., Pattie, A., Murphy, L., Reynolds, R. M., Elliot, R., Penton-voak, I. S., Munafò, M. R., Evans, K. L., Seckl, J. R., Wardlaw, J. M., Lawrie, S. M., Haley, C. S., Porteous, D. J., Deary, I. J., Murray, A. D. & Mcintosh, A. M., 25 Nov 2019, In : Wellcome Open Research . 4, p. 185

    Research output: Contribution to journalArticle

  26. Editorial: Early corticosteroids in ulcerative colitis

    Kennedy, N. A. & Satsangi, J., Sep 2014, In : Alimentary Pharmacology and Therapeutics. 40, 6, p. 727

    Research output: Contribution to journalArticle

  27. Genetic and environmental determinants of stressful life events and their overlap with depression and neuroticism

    Clarke, T., Zeng, Y., Navrady, L., Xia, C., Haley, C., Campbell, A., Navarro, P., Amador, C., Adams, M. J., Howard, D. M., Soler, A., Hayward, C., Thomson, P. A., Smith, B. H., Padmanabhan, S., Hocking, L. J., Hall, L. S., Porteous, D. J., Deary, I. J. & Mcintosh, A. M., 14 Feb 2018, In : Wellcome Open Research . 3, p. 11

    Research output: Contribution to journalArticle

  28. Article › Research › Peer-reviewed
  29. "Blind imagination'': Brain activation after loss of the mind's eye

    Zeman, A., McGonigle, D., Gountouna, E., Torrens, L., Della Sala, S. & Logie, R., Feb 2007, In : Journal of Neurology Neurosurgery & Psychiatry. 78, 2, p. 209-209 1 p.

    Research output: Contribution to journalArticle

  30. 11β-Hydroxysteroid Dehydrogenase Type 1, But Not Type 2, Deficiency Worsens Acute Inflammation and Experimental Arthritis in Mice

    Coutinho, A. E., Gray, M., Brownstein, D. G., Salter, D. M., Sawatzky, D. A., Clay, S., Gilmour, J. S., Seckl, J. R., Savill, J. S. & Chapman, K. E., Jan 2012, In : Endocrinology . 153, 1, p. 234-240 7 p.

    Research output: Contribution to journalArticle

  31. 5-fluorouracil steady state pharmacokinetics and outcome in patients receiving protracted venous infusion for advanced colorectal cancer

    Jodrell, D. I., Stewart, M., Aird, R., Knowles, G., Bowman, A., Wall, L., Cummings, J. & Mclean, C., 2001, In : British Journal of Cancer. 84, 5, p. 600-603

    Research output: Contribution to journalArticle

  32. 708 Common and 2010 rare DISC1 locus variants identified in 1542 subjects: analysis for association with psychiatric disorder and cognitive traits

    Thomson, P. A., Parla, J. S., McRae, A. F., Kramer, M., Ramakrishnan, K., Yao, J., Soares, D. C., McCarthy, S., Morris, S. W., Cardone, L., Cass, S., Ghiban, E., Hennah, W., Evans, K. L., Rebolini, D., Millar, J. K., Harris, S. E., Starr, J. M., MacIntyre, D. J., Generation Scotland & 7 others, McIntosh, A. M., Watson, J. D., Deary, I. J., Visscher, P. M., Blackwood, D. H., McCombie, W. R. & Porteous, D. J., 1 Jun 2014, In : Molecular Psychiatry. 19, 6, p. 668-675 8 p.

    Research output: Contribution to journalArticle

  33. APOE E4 status predicts age-related cognitive decline in the ninth decade: longitudinal follow-up of the Lothian Birth Cohort 1921

    Schiepers, O. J. G., Harris, S. E., Gow, A. J., Pattie, A., Brett, C. E., Starr, J. & Deary, I. J., Mar 2012, In : Molecular Psychiatry. 17, 3, p. 315-324

    Research output: Contribution to journalArticle

  34. A 25-year old woman with recurrent episodes of collapse and loss of consciousness

    Wildman, J., Baker, M. R., Price, D. A., Tiwari, S., Kumar, H., Rice, G. I., Crow, Y. & Thomas, R. H., 1 May 2020, In : Neurology.

    Research output: Contribution to journalArticle

  35. A 29-year-old male with chest pain and haemoptysis

    Young, E. C., Mills, N. L., Henriksen, P. A., Murchison, J. T., Salter, D. M., Hayward, R. L., Newby, D. E. & Simpson, A. J., 2008, In : European Respiratory Journal. 32, 5, p. 1404-7 4 p.

    Research output: Contribution to journalArticle

  36. A 4q35.2 subtelomeric deletion identified in a screen of patients with co-morbid psychiatric illness and mental retardation

    Pickard, B. S., Hollox, E. J., Malloy, M. P., Porteous, D. J., Blackwood, D. H., Armour, J. A. & Muir, W. J., 2004, In : BMC Medical Genetics. 5, p. 21 1 p.

    Research output: Contribution to journalArticle

  37. A 5' promoter region SNP in NRG1 is associated with schizophrenia risk and type III isoform expression

    Nicodemus, K. K., Law, A. J., Luna, A., Vakkalanka, R., Straub, R. E., Kleinman, J. E. & Weinberger, D. R., Aug 2009, In : Molecular Psychiatry. 14, 8, p. 741-3 3 p.

    Research output: Contribution to journalArticle

  38. A 6.9-Mb high-resolution BAC/PAC contig of human 4p15.3-p16.1, a candidate region for bipolar affective disorder

    Evans, K., Le Hellard, S., Morris, S. W., Lawson, D., Whitton, C., Semple, C., Fantes, J. A., Torrance, H. S., Malloy, M. P., Maule, J. C., Humphray, S. J., Ross, M. T., Bentley, D. R., Muir, W., Blackwood, D. & Porteous, D. J., 2001, In : Genomics. 71, 3, p. 315-23 9 p.

    Research output: Contribution to journalArticle

  39. A 700-kb physical map of a region of 16q23.2 homozygously deleted in multiple cancers and spanning the common fragile site FRA16D

    Paige, A. J., Taylor, K. J., Stewart, A., Sgouros, J. G., Gabra, H., Sellar, G. C., Smyth, J. F., Porteous, D. J. & Watson, J. E., 2000, In : Cancer Research. 60, 6, p. 1690-7 8 p.

    Research output: Contribution to journalArticle

  40. A British Society of Paediatric Gastroenterology, Hepatology and Nutrition survey of the effectiveness and safety of adalimumab in children with inflammatory bowel disease

    Russell, R. K., Wilson, M. L., Loganathan, S., Bourke, B., Kiparissi, F., Mahdi, G., Torrente, F., Rodrigues, A., Davies, I., Thomas, A., Akobeng, A. K., Fagbemi, A., Hyer, W., Spray, C., Vaish, S., Rogers, P., McGrogan, P., Heuschkel, R. B., Ayub, N., Fell, J. M. & 8 others, Afzal, N. A., Green, M., Murphy, M. S., Rao, P., Shah, N., Ho, G. -T., Naik, S. & Wilson, D. C., 15 Apr 2011, In : Alimentary Pharmacology and Therapeutics. 33, 8, p. 946-953 8 p.

    Research output: Contribution to journalArticle

  41. A Class III Semaphorin (Sema3e) Inhibits Mouse Osteoblast Migration and Decreases Osteoclast Formation In Vitro

    Hughes, A., Kleine-Albers, J., Helfrich, M. H., Ralston, S. H. & Rogers, M. J., Feb 2012, In : Calcified Tissue International. 90, 2, p. 151-162 12 p.

    Research output: Contribution to journalArticle

  42. A Combined Pathway and Regional Heritability Analysis Indicates NETRIN1 Pathway is Associated with Major Depressive Disorder

    Zeng, Y., Navarro, P., Fernandez-pujals, A. M., Hall, L. S., Clarke, T., Thomson, P. A., Smith, B. H., Hocking, L. J., Padmanabhan, S., Hayward, C., Macintyre, D. J., Wray, N. R., Deary, I., Porteous, D. J., Haley, C. S. & Mcintosh, A. M., 15 Feb 2017, In : Biological Psychiatry. 81, 4, p. 336-346

    Research output: Contribution to journalArticle

  43. A DNA methylation biomarker of alcohol consumption

    Liu, C., Marioni, R. E., Hedman, K. K., Pfeiffer, L., Tsai, P. C., Reynolds, L. M., Just, A. C., Duan, Q., Boer, C. G., Tanaka, T., Elks, C. E., Aslibekyan, S., Brody, J. A., Kühnel, B., Herder, C., Almli, L. M., Zhi, D., Wang, Y., Huan, T., Yao, C. & 53 others, Mendelson, M. M., Joehanes, R., Liang, L., Love, S. A., Guan, W., Shah, S., McRae, A. F., Kretschmer, A., Prokisch, H., Strauch, K., Peters, A., Visscher, P. M., Wray, N. R., Guo, X., Wiggins, K. L., Smith, A. K., Binder, E. B., Ressler, K. J., Irvin, M. R., Absher, D. M., Hernandez, D., Ferrucci, L., Bandinelli, S., Lohman, K., Ding, J., Trevisi, L., Gustafsson, S., Sandling, J. H., Stolk, L., Uitterlinden, A. G., Yet, I., Castillo-Fernandez, J. E., Spector, T. D., Schwartz, J. D., Vokonas, P., Lind, L., Li, Y., Fornage, M., Arnett, D. K., Wareham, N. J., Sotoodehnia, N., Ong, K. K., van Meurs, J. B. J., Conneely, K. N., Baccarelli, A. A., Deary, I. J., Bell, J. T., North, K. E., Liu, Y., Waldenberger, M., London, S. J., Ingelsson, E. & Levy, D., 15 Nov 2016, In : Molecular Psychiatry.

    Research output: Contribution to journalArticle

  44. A DNA nanoswitch incorporating the fluorescent base analogue 2-aminopurine detects single nucleotide mismatches in unlabelled targets

    Campbell, C. J., Mountford, C. P., Stoquert, H. C., Buck, A. H., Dickinson, P., Ferapontova, E., Terry, J. G., Beattie, J. S., Walton, A. J., Crain, J., Ghazal, P. & Mount, A. R., 2009, In : Analyst. 134, 9, p. 1873-1879 7 p.

    Research output: Contribution to journalArticle

  45. A Dominantly Inherited 5' UTR Variant Causing Methylation-Associated Silencing of BRCA1 as a Cause of Breast and Ovarian Cancer

    Evans, D. G. R., van Veen, E. M., Byers, H. J., Wallace, A. J., Ellingford, J. M., Beaman, G., Santoyo-Lopez, J., Aitman, T. J., Eccles, D. M., Lalloo, F. I., Smith, M. J. & Newman, W. G., 2 Aug 2018, In : American Journal of Human Genetics. 103, 2, p. 213-220 8 p.

    Research output: Contribution to journalArticle

  46. A Genome-Wide Association Study Provides New Evidence That CACNA1C Gene is Associated With Diabetic Cataract

    Chang, C., Zhang, K., Veluchamy, A., Hébert, H. L., Looker, H. C., Colhoun, H. M., Palmer, C. N. A. & Meng, W., 1 Apr 2016, In : Investigative Ophthalmology & Visual Science. 57, 4, p. 2246-50 5 p.

    Research output: Contribution to journalArticle

  47. A Genome-Wide Association Study of Diabetic Kidney Disease in Subjects With Type 2 Diabetes

    van Zuydam, N. R., Ahlqvist, E., Sandholm, N., Deshmukh, H., Rayner, N. W., Abdalla, M., Ladenvall, C., Ziemek, D., Fauman, E., Robertson, N. R., McKeigue, P. M., Valo, E., Forsblom, C., Harjutsalo, V., Perna, A., Rurali, E., Marcovecchio, M. L., Igo, R. P., Salem, R. M., Perico, N. & 31 others, Lajer, M., Käräjämäki, A., Imamura, M., Kubo, M., Takahashi, A., Sim, X., Liu, J., van Dam, R. M., Jiang, G., Tam, C. H. T., Luk, A. O. Y., Lee, H. M., Lim, C. K. P., Szeto, C. C., So, W. Y., Chan, J. C. N., Ang, S. F., Dorajoo, R., Wang, L., Hua Clara, T. S., McKnight, A-J., Duffy, S., Pezzolesi, M. G., Consortium, G., Marre, M., Gyorgy, B., Hadjadj, S., Hiraki, L. T., Ahluwalia, T. S., Colhoun, H. M. & FINNDIANE Study centres, 1 Jul 2018, In : Diabetes .

    Research output: Contribution to journalArticle

  48. A Large-Scale Multi-ancestry Genome-wide Study Accounting for Smoking Behavior Identifies Multiple Significant Loci for Blood Pressure

    Sung, Y. J., Winkler, T. W., de Las Fuentes, L., Bentley, A. R., Brown, M. R., Kraja, A. T., Schwander, K., Ntalla, I., Guo, X., Franceschini, N., Lu, Y., Cheng, Y-C., Sim, X., Vojinovic, D., Marten, J., Musani, S. K., Li, C., Feitosa, M. F., Kilpeläinen, T. O., Richard, M. A. & 31 others, Noordam, R., Aslibekyan, S., Aschard, H., Bartz, T. M., Dorajoo, R., Liu, Y., Manning, A. K., Rankinen, T., Smith, A. V., Tajuddin, S. M., Tayo, B. O., Warren, H. R., Zhao, W., Zhou, Y., Matoba, N., Sofer, T., Alver, M., Amini, M., Boissel, M., Chai, J. F., Chen, X., Divers, J., Harris, S. E., Campbell, A., Hagenaars, S. P., Polasek, O., Rudan, I., Starr, J. M., Deary, I. J., Hayward, C. & CHARGE Neurology Working Group, Mar 2018, In : American Journal of Human Genetics. 102, 3

    Research output: Contribution to journalArticle

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