Edinburgh Research Explorer

Institute for Adaptive and Neural Computation

Organisational unit: Research Institute

  1. 2006
  2. Generation of time delays: simplified models of intracellular signalling in cerebellar Purkinje cells

    Steuber, V., Willshaw, D. & Van Ooyen, A., 2006, In : Network: Computation in Neural Systems. 17, 2, p. 173-91 19 p.

    Research output: Contribution to journalArticle

  3. Gravitaxis in Drosophila melanogaster: a forward genetic screen

    Armstrong, J. D., Texada, M. J., Munjaal, R., Baker, D. A. & Beckingham, K. M., 2006, In : Genes Brain and Behavior. 5, 3, p. 222-239 18 p.

    Research output: Contribution to journalArticle

  4. Identifying Submodules of Cellular Regulatory Networks

    Sanguinetti, G., Rattray, M. & Lawrence, N. D., 2006, Computational Methods in Systems Biology. Priami, C. (ed.). Springer Berlin Heidelberg, p. 155-168 14 p. (Lecture Notes in Computer Science; vol. 4210).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  5. Improved segmentation reproducibility in group tractography using a quantitative tract similarity measure

    Clayden, J. D., Bastin, M. E. & Storkey, A. J., 2006, In : NeuroImage. 33, 2, p. 482-92 11 p.

    Research output: Contribution to journalArticle

  6. Joint Maps for Orientation, Eye, and Direction Preference in a Self-Organizing Model of V1

    Bednar, J. A. & Miikkulainen, R., 2006, In : Neurocomputing. 69, p. 1272-1276 5 p.

    Research output: Contribution to journalArticle

  7. Learning structural equation models for fMRI

    Simonotto, E., Whalley, H., Lawrie, S., Murray, L., Mcgonigle, D. & Storkey, A. J., 2006, Advances in Neural Information Processing Systems 19 (NIPS 2006). MIT Press, p. 1329-1336 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  8. Long-range downstream enhancers are essential for Pax6 expression

    Kleinjan, D. A., Seawright, A., Mella, S., Carr, C. B., Tyas, D. A., Simpson, I., Mason, J. O., Price, D. J. & van Heyningen, V., 2006, In : Developmental Biology. 299, 2, p. 563-81 19 p.

    Research output: Contribution to journalArticle

  9. MCMC for doubly-intractable distributions

    Murray, I., Ghahramani, Z. & MacKay, D. J. C., 2006, Proceedings of the 22nd Annual Conference on Uncertainty in Artificial Intelligence (UAI-06). AUAI Press, p. 359-366 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  10. Missing Data in Kernel PCA

    Sanguinetti, G. & Lawrence, N. D., 2006, Machine Learning: ECML 2006: 17th European Conference on Machine Learning Berlin, Germany, September 18-22, 2006 Proceedings. Fürnkranz, J., Scheffer, T. & Spiliopoulou, M. (eds.). Springer Berlin Heidelberg, p. 751-758 8 p. (Lecture Notes in Computer Science; vol. 4212).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  11. Modelling transcriptional regulation using Gaussian processes

    Lawrence, N. D., Sanguinetti, G. & Rattray, M., 2006, Advances in Neural Information Processing Systems. p. 785-792 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  12. Motion aftereffects in a self-organizing model of the primary visual cortex

    Ball, C. & Bednar, J., 2006, p. 34.

    Research output: Contribution to conferencePoster

  13. Neighbourhood tractography: a new approach to seed point placement for fibre tracking

    Clayden, J. D., Bastin, M. & Storkey, A., 2006, Proceedings of the British Chapter of the ISMRM, Guildford, UK.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  14. Nested sampling for Potts models

    Murray, I., MacKay, D. J. C., Ghahramani, Z. & Skilling, J., 2006, Advances in Neural Information Processing Systems 18. Weiss, Y., Schölkopf, B. & Platt, J. (eds.). Cambridge, MA: MIT Press, p. 947-954 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  15. On the extension of eigenvectors to new datapoints

    Williams, C. K. I., 2006, p. 1-3, 3 p.

    Research output: Working paper

  16. Organization of brain complexity--synapse proteome form and function

    Pocklington, A. J., Armstrong, J. D. & Grant, S. G. N., 2006, In : Briefings in functional genomics & proteomics. 5, 1, p. 66-73 8 p.

    Research output: Contribution to journalArticle

  17. Penetrance of eye defects in mice heterozygous for mutation of Gli3 is enhanced by heterozygous mutation of Pax6

    Zaki, P. A., Collinson, J. M., Toraiwa, J., Simpson, T. I., Price, D. & Quinn, J. C., 2006, In : BMC Developmental Biology. 6, 11 p., 46.

    Research output: Contribution to journalArticle

  18. Predicting Ambulance Diversion in an Adult Emergency Department using a Gaussian Process

    Leegon, J., Hoot, N., Aronsky, D. & Storkey, A., 2006, AMIA 2007 Symposium Proceedings. p. 1026 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  19. Predictive Search Distributions

    Bonilla, E. V., Williams, C. K. I., Agakov, F., Cavazos, J., Thomson, J. & O'Boyle, M., 2006, ICML '06 Proceedings of the 23rd international conference on Machine learning. ACM, p. 121-128 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  20. Prenatal Development of Ocular Dominance and Orientation Maps in a Self-Organizing Model of V1

    Jegelka, S., Bednar, J. A. & Miikkulainen, R., 2006, In : Neurocomputing. 69, p. 1291-1296 6 p.

    Research output: Contribution to journalArticle

  21. Principled Hybrids of Generative and Discriminative Models

    Lasserre, J. A., Bishop, C. & Minka, T. P., 2006, Computer Vision and Pattern Recognition, 2006 IEEE Computer Society Conference on. Institute of Electrical and Electronics Engineers (IEEE), Vol. 1. p. 87-94 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  22. Probabilistic in silico prediction of protein-peptide interactions

    Lehrach, W. P., Husmeier, D. & Williams, C. K. I., 2006, Systems Biology and Regulatory Genomics: Joint Annual RECOMB 2005 Satellite Workshops on Systems Biology and on Regulatory Genomics, San Diego, CA, USA; December 2-4, 2005, Revised Selected Papers. Springer Berlin Heidelberg, p. 188-197 10 p. (Lecture Notes in Computer Science; vol. 4023).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  23. Probabilistic inference for solving discrete and continuous state Markov Decision Processes

    Toussaint, M. & Storkey, A., 2006, ICML '06 Proceedings of the 23rd international conference on Machine learning. ACM, p. 945-952 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  24. Reconstructing protein complexes: From proteomics to systems biology

    Armstrong, J. D., Pocklington, A. J., Cumiskey, M. A. & Grant, S. G. N., 2006, In : Proteomics. 6, 17, p. 4724-4731 8 p.

    Research output: Contribution to journalArticle

  25. Sequential Learning of Layered Models from Video

    Titsias, M. K. & Williams, C. K. I., 2006, Toward Category-Level Object Recognition. Ponce, J., Hebert, M., Schmid, C. & Zisserman, A. (eds.). Springer Berlin Heidelberg, Vol. V. p. 577-595 19 p. (Lecture Notes in Computer Science; vol. 4170).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  26. Studying neuronal function using the Drosophila genetic system

    Armstrong, D. & Goodwin, S. F., 2006, Molecular Biology of the Neuron. p. 1-14 15 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  27. Suboptimal triangular controller design methodology for full MIMO stable systems

    Oyarzun, DA. & Salgado, M. E., 2006, Proceedings of the UKACC Conference. Glasgow, UK, 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  28. The 2005 PASCAL visual object classes challenge

    Everingham, M., Zisserman, A., Williams, C. K. I., Van Gool, L., Allan, M., Bishop, C. M., Chapelle, O., Dalal, N., Deselaers, T., Dorko, G., Duffner, S., Eichhorn, J., Farquhar, J. D. R., Fritz, M., Garcia, C., Griffiths, T., Jurie, F., Keysers, D., Koskela, M., Laaksonen, J. & 14 others, Larlus, D., Leibe, B., Meng, H., Ney, H., Schiele, B., Schmid, C., Seemann, E., Shawe-Taylor, J., Storkey, A., Szedmak, S., Triggs, B., Ulusoy, I., Viitaniemi, V. & Zhang, J., 2006, Machine Learning Challenges: Evaluating Predictive Uncertainty, Visual Object Classification, and Recognising Tectual Entailment . Quinonero-Candela, J., Dagan, Magnini, B. & D'Alche-Buc, F. (eds.). Berlin: Springer-Verlag Berlin Heidelberg, p. 117-176 60 p. (Lecture Notes in Computer Science; vol. 3944).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  29. The PASCAL visual object classes challenge 2006 (VOC2006) results

    Everingham, M., Zisserman, A., Williams, C. K. I. & Van Gool, L., 2006, 57 p.

    Research output: Working paper

  30. Using Machine Learning to Focus Iterative Optimization

    Agakov, F., Bonilla, E., Cavazos, J., Franke, B., Fursin, G., O'Boyle, M. F. P., Thomson, J., Toussaint, M. & Williams, C. K. I., 2006, Proceedings of the International Symposium on Code Generation and Optimization. Washington, DC, USA: Institute of Electrical and Electronics Engineers (IEEE), p. 295-305 11 p. (CGO '06).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  31. The optimal synapse for sparse, binary signals in the rod pathway: Neural Computation

    Clark, P. T. & van Rossum, M. C. W., Jan 2006, In : Neural Computation. 18, 1, p. 26-44 19 p.

    Research output: Contribution to journalArticle

  32. The proteomes of neurotransmitter receptor complexes form modular networks with distributed functionality underlying plasticity and behaviour

    Pocklington, A. J., Cumiskey, M., Armstrong, J. D. & Grant, S. G. N., 17 Jan 2006, In : Molecular Systems Biology. 2, 14 p., 2006.0023.

    Research output: Contribution to journalArticle

  33. A regularized discriminative model for the prediction of protein–peptide interactions

    Lehrach, W. P., Husmeier, D. & Williams, C. K. I., Mar 2006, In : Bioinformatics. 22, 5, p. 532-540 9 p.

    Research output: Contribution to journalArticle

  34. Excitability changes that complement Hebbian learning.

    Janowitz, M. K. & van Rossum, M. C. W., Mar 2006, In : Network: Computation in Neural Systems. 17, 1, p. 31 - 41

    Research output: Contribution to journalArticle

  35. Propagating uncertainty in microarray data analysis

    Rattray, M., Liu, X., Sanguinetti, G., Milo, M. & Lawrence, N. D., Mar 2006, In : Briefings in bioinformatics. 7, 1, p. 37-47 11 p.

    Research output: Contribution to journalArticle

  36. Sparse Forward-Backward Using Minimum Divergence Beams for Fast Training Of Conditional Random Fields

    Pal, C., Sutton, C. & McCallum, A., 1 May 2006, Acoustics, Speech and Signal Processing, 2006. ICASSP 2006 Proceedings. 2006 IEEE International Conference on. Institute of Electrical and Electronics Engineers (IEEE), Vol. 5. p. 581-584 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  37. Reducing Weight Undertraining in Structured Discriminative Learning

    Sutton, C., Sindelar, M. & McCallum, A., 1 Jun 2006, Proceedings of the Human Language Technology Conference of the NAACL, Main Conference. New York City, USA: Association for Computational Linguistics, p. 89-95 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  38. A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription

    Sanguinetti, G., Rattray, M. & Lawrence, N. D., Jul 2006, In : Bioinformatics. 22, 14, p. 1753-1759 7 p.

    Research output: Contribution to journalArticle

  39. Basic Integrated Modelling: A Case Study

    Salgado, M. E. & Oyarzún, D. R., 1 Jul 2006, In : International Journal of Electrical Engineering Education. 43, 3, p. 217-231 15 p.

    Research output: Contribution to journalArticle

  40. Local Training and Belief Propagation

    Sutton, C. & Minka, T., Aug 2006, Microsoft Research, 10 p. (Microsoft Research Technical Reports; no. MSR-TR-2006-121).

    Research output: Working paper

  41. Functional imaging as a predictor of schizophrenia

    Whalley, H. C., Simonotto, E., Moorhead, W., McIntosh, A., Marshall, I., Ebmeier, K. P., Owens, D. G. C., Goddard, N. H., Johnstone, E. C. & Lawrie, S. M., 1 Sep 2006, In : Biological Psychiatry. 60, 5, p. 454-62 9 p.

    Research output: Contribution to journalArticle

  42. Event-related fMRI of word classification and successful word recognition in subjects at genetically enhanced risk of schizophrenia

    Whyte, M-C., Whalley, H. C., Simonotto, E., Flett, S., Shillcock, R., Marshall, I., Goddard, N. H., Johnstone, E. C. & Lawrie, S. M., Oct 2006, In : Psychological Medicine . 36, 10, p. 1427-39 13 p.

    Research output: Contribution to journalArticle

  43. Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities

    Sanguinetti, G., Lawrence, N. D. & Rattray, M., Nov 2006, In : Bioinformatics. 22, 22, p. 2775-2781 7 p.

    Research output: Contribution to journalArticle

  44. The effects of incomplete protein interaction data on structural and evolutionary inferences

    de Silva, E., Thorne, T., Ingram, P., Agrafioti, I., Swire, J., Wiuf, C. & Stumpf, M. P. H., 3 Nov 2006, In : BMC Biology. 4, 39.

    Research output: Contribution to journalArticle

  45. Probabilistic inference for solving (PO) MDPs

    Toussaint, M., Harmeling, S. & Storkey, A., Dec 2006, 22 p.

    Research output: Working paper

  46. 2007
  47. A Biophysical model of long-term potentiation and synaptic tagging

    Barrett, A., Billings, G., Morris, R. G. M. & van Rossum, M. C. W., 2007.

    Research output: Contribution to conferencePoster

  48. A Primitive Based Generative Model to Infer Timing Information in Unpartitioned Handwriting Data

    Williams, B. H., Toussaint, M. & Storkey, A. J., 2007, IJCAI 2007, Proceedings of the 20th International Joint Conference on Artificial Intelligence, Hyderabad, India, January 6-12, 2007. Veloso, MM. (ed.). Freiburg: IJCAI-INT JOINT CONF ARTIF INTELL, p. 1119-1124 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  49. Acceleration of AMPA receptor kinetics underlies temperature-dependent changes in synaptic strength at the rat calyx of Held

    Postlethwaite, M., Hennig, M. H., Steinert, J. R., Graham, B. P. & Forsythe, I. D., 2007, In : Journal of Physiology. 579, 1, p. 69-84 16 p.

    Research output: Contribution to journalArticle

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