Edinburgh Research Explorer

Andrew Millar

Chair of Systems Biology

  1. Chapter (peer-reviewed) › Research › Not peer-reviewed
  2. Light Regulation and Biological Clocks

    Millar, A., Whitelam, G. C., Anderson, M. L. (ed.) & Roberts, J. A. . (ed.), 1998, Arabidopsis. Sheffield, England: Sheffield Academic Press, 20 p. (Annual plant reviews; vol. v. 1).

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  3. Sample preparation for phosphoproteomic analysis of circadian time series in Arabidopsis thaliana

    Krahmer, J., Hindle, M. M., Martin, S. F., Le Bihan, T. & Millar, A. J., 2015, Methods in Enzymology: Membrane Proteins—Engineering, Purification and Crystallization. Elsevier, Vol. 551. p. 405-31 27 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  4. The cellular organisation of circadian rhythms in plants: Not one but many clocks.

    Millar, A., 1998, Biological Rhythms and Photoperiodism in Plants. Bios Scientific Publishers, 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter (peer-reviewed)

  5. Poster › Research › Not peer-reviewed
  6. Article › Research › Not peer-reviewed
  7. Biological clocks in theory and experiments

    Millar, A., Brown, P., Edwards, K., Hall, A., Locke, J., Rand, D., Anderson, P. & Smith, J., Apr 2006, In: Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 143, 4, p. S140-S140 1 p.

    Research output: Contribution to journalArticle

  8. Corrigendum: Peroxiredoxins are conserved markers of circadian rhythms

    Edgar, R. S., Green, E. W., Zhao, Y., van Ooijen, G., Olmedo, M., Qin, X., Xu, Y., Pan, M., Valekunja, U. K., Feeney, K. A., Maywood, E. S., Hastings, M. H., Baliga, N. S., Merrow, M., Millar, A. J., Johnson, C. H., Kyriacou, C. P., O'Neill, J. S. & Reddy, A. B., 2012, In: Nature. 485, 7399, p. 459–464

    Research output: Contribution to journalArticle

  9. Dissecting and reconstructing the multi-loop mechanism of the circadian clock: Abstract, Society for Experimental Biology Annual Main Meeting 31st March 2007

    Millar, A., Rand, D., Goryanin, I., Saithong, T. & Edwards, K., Apr 2007, In: Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 146, 4, p. S229-S229 1 p.

    Research output: Contribution to journalArticle

  10. Mechanistic modelling of flowering regulators based on molecular data

    Millar, A., Brown, P., Saithong, T., Salazar, D., Locke, J., Carre, I. & Rand, D., Apr 2006, In: Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 143, 4, p. S164-S164 1 p., 5.6.

    Research output: Contribution to journalArticle

  11. PlaSMo: Making existing plant and crop mathematical models available to plant systems biologists

    Davey, C., Ougham, H., Millar, A., Thomas, H., Tindal, C. & Muetzelfeldt, R., Jun 2009, In: Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology. 153A, 2, p. S225-S226 2 p.

    Research output: Contribution to journalArticle

  12. Real-time imaging of transcription in living cells and tissues

    White, M. R., Wood, C. D. & Millar, A. J., 1996, In: Biochemical Society Transactions. 24, 3, p. 411S

    Research output: Contribution to journalArticle

  13. Article › Research › Peer-reviewed
  14. 22 Circadian-regulated gene transcription in Arabidopsis thaliana

    Kay, S. A. & Millar, A. J., 1 Jan 1992, In: Discussions in Neuroscience. 8, 2-3, p. 103-105 3 p.

    Research output: Contribution to journalArticlepeer-review

  15. A Bayesian approach for structure learning in oscillating regulatory networks

    Trejo-Banos, D., Millar, A. & Sanguinetti, G., 14 Jul 2015, In: Bioinformatics. 31, 22, p. 3617-3624 8 p.

    Research output: Contribution to journalArticlepeer-review

  16. A multi-model Framework for the Arabidopsis life cycle

    Zardilis, A., Hume, A. & Millar, A., 19 Feb 2019, In: Journal of Experimental Botany. 70, 9, p. 2463–2477 16 p.

    Research output: Contribution to journalArticlepeer-review

  17. A novel circadian phenotype based on firefly luciferase expression in transgenic plants

    Millar, A. J., Short, S. R., Chua, N. H. & Kay, S. A., 1992, In: The Plant Cell. 4, 9, p. 1075-87 13 p.

    Research output: Contribution to journalArticlepeer-review

  18. A reduced-function allele reveals that EARLY FLOWERING3 repressive action on the circadian clock is modulated by phytochrome signals in Arabidopsis

    Kolmos, E., Herrero, E., Bujdoso, N., Millar, A. J., Tóth, R., Gyula, P., Nagy, F. & Davis, S. J., Sep 2011, In: The Plant Cell. 23, 9, p. 3230-3246 17 p.

    Research output: Contribution to journalArticlepeer-review

  19. A suite of photoreceptors entrains the plant circadian clock

    Millar, A. J., 2003, In: Journal of biological rhythms. 18, 3, p. 217-26 10 p.

    Research output: Contribution to journalArticlepeer-review

  20. A switchable light-input, light-output system modelled and constructed in yeast

    Sorokina, O., Kapus, A., Terecskei, K., Dixon, L. E., Kozma-Bognar, L., Nagy, F. & Millar, A. J., Sep 2009, In: Journal of Biological Engineering. 3, 15, 16 p., 15.

    Research output: Contribution to journalArticlepeer-review

  21. An Arabidopsis mutant hypersensitive to red and far-red light signals

    Genoud, T., Millar, A. J., Nishizawa, N., Kay, S. A., Schäfer, E., Nagatani, A. & Chua, N. H., 1998, In: The Plant Cell. 10, 6, p. 889-904 16 p.

    Research output: Contribution to journalArticlepeer-review

  22. An explanatory model of temperature influence on flowering through whole-plant accumulation of FT in Arabidopsis thaliana  

    Kinmonth-Schultz, H. A., MacEwen, M. J. S., Seaton, D. D., Millar, A. J., Imaizumi, T. & Kim, S-H., 15 May 2019, In: In Silico Plants. 1, 1, diz006.

    Research output: Contribution to journalArticlepeer-review

  23. Analysis of circadian leaf movement rhythms in Arabidopsis thaliana

    Edwards, K. D. & Millar, A. J., 2007, In: Methods in Molecular Biology. 362, p. 103-13 11 p.

    Research output: Contribution to journalArticlepeer-review

  24. Arabidopsis thaliana circadian clock is regulated by the small GTPase LIP1

    Kevei, E., Gyula, P., Fehér, B., Tóth, R., Viczián, A., Kircher, S., Rea, D., Dorjgotov, D., Schäfer, E., Millar, A. J., Kozma-Bognár, L. & Nagy, F., 2007, In: Current biology : CB. 17, 17, p. 1456-64 9 p.

    Research output: Contribution to journalArticlepeer-review

  25. Attenuation of phytochrome A and B signaling pathways by the Arabidopsis circadian clock

    Anderson, S. L., Somers, D. E., Millar, A. J., Hanson, K., Chory, J. & Kay, S. A., 1997, In: The Plant Cell. 9, 10, p. 1727-43 17 p.

    Research output: Contribution to journalArticlepeer-review

  26. Better research by efficient sharing: Evaluation of free management platforms for synthetic biology designs

    Urquiza-garcía, U., Zieliński, T. & Millar, A. J., 20 Jun 2019, In: Synthetic Biology. 4, 1, ysz016.

    Research output: Contribution to journalArticlepeer-review

  27. Chromar, a Rule-based Language of Parameterised Objects

    Honorato-Zimmer, R., Millar, A. J., Plotkin, G. D. & Zardilis, A., 10 Apr 2018, In: Electronic Notes in Theoretical Computer Science. 335, p. 49-66 18 p.

    Research output: Contribution to journalArticlepeer-review

  28. Chromar, a language of parameterised objects

    Honorato Zimmer, R., Millar, A. J., Plotkin, G. D. & Zardilis, A., 8 Aug 2017, In: Theoretical Computer Science. 25 p.

    Research output: Contribution to journalArticlepeer-review

  29. Circadian Control of cab Gene Transcription and mRNA Accumulation in Arabidopsis

    Millar, A. J. & Kay, S. A., 1991, In: The Plant Cell. 3, 5, p. 541-550 10 p.

    Research output: Contribution to journalArticlepeer-review

  30. Circadian biology: clocks for the real world

    McWatters, H., Dunlap, J. C. & Millar, A. J., 1999, In: Current biology : CB. 9, 17, p. R633-5

    Research output: Contribution to journalArticlepeer-review

  31. Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees

    Edwards, K. D., Takata, N., Johansson, M., Jurca, M., Novák, O., Hényková, E., Liverani, S., Kozarewa, I., Strnad, M., Millar, A. J., Ljung, K. & Eriksson, M. E., 15 Apr 2018, In: Plant, Cell and Environment. 15 p.

    Research output: Contribution to journalArticlepeer-review

  32. Circadian clock mutants in Arabidopsis identified by luciferase imaging

    Millar, A. J., Carré, I. A., Strayer, C. A., Chua, N. H. & Kay, S. A., 1995, In: Science. 267, 5201, p. 1161-3 3 p.

    Research output: Contribution to journalArticlepeer-review

  33. Circadian clock parameter measurement: characterization of clock transcription factors using surface plasmon resonance

    O'Neill, J. S., van Ooijen, G., Le Bihan, T. & Millar, A. J., Apr 2011, In: Journal of biological rhythms. 26, 2, p. 91-98 8 p.

    Research output: Contribution to journalArticlepeer-review

  34. Circadian clock-regulated expression of phytochrome and cryptochrome genes in Arabidopsis

    Tóth, R., Kevei, E., Hall, A., Millar, A. J., Nagy, F. & Kozma-Bognár, L., 2001, In: Plant physiology. 127, 4, p. 1607-16 10 p.

    Research output: Contribution to journalArticlepeer-review

  35. Circadian dysfunction causes aberrant hypocotyl elongation patterns in Arabidopsis

    Dowson-Day, M. J. & Millar, A. J., 1999, In: The Plant Journal. 17, 1, p. 63-71 9 p.

    Research output: Contribution to journalArticlepeer-review

  36. Circadian genetics in the model higher plant, Arabidopsis thaliana

    Southern, M. M. & Millar, A. J., 2005, In: Methods in enzymology. 393, p. 23-35 13 p.

    Research output: Contribution to journalArticlepeer-review

  37. Circadian rhythms: PASsing time

    Millar, A. J., 1997, In: Current biology : CB. 7, 8, p. R474-6

    Research output: Contribution to journalArticlepeer-review

  38. Circadian rhythms of ethylene emission in Arabidopsis

    Thain, S. C., Vandenbussche, F., Laarhoven, L. J. J., Dowson-Day, M. J., Wang, Z-Y., Tobin, E. M., Harren, F. J. M., Millar, A. J. & Van Der Straeten, D., 2004, In: Plant physiology. 136, 3, p. 3751-61 11 p.

    Research output: Contribution to journalArticlepeer-review

  39. Circadian rhythms persist without transcription in a eukaryote

    O'Neill, J. S., van Ooijen, G., Dixon, L. E., Troein, C., Corellou, F., Bouget, F-Y., Reddy, A. B. & Millar, A. J., 2011, In: Nature. 469, 7331, p. 554-8 5 p.

    Research output: Contribution to journalArticlepeer-review

  40. Clock proteins: turned over after hours?

    Millar, A. J., 2000, In: Current biology : CB. 10, 14, p. R529-31

    Research output: Contribution to journalArticlepeer-review

  41. Conditional circadian dysfunction of the Arabidopsis early-flowering 3 mutant

    Hicks, K. A., Millar, A. J., Carré, I. A., Somers, D. E., Straume, M., Meeks-Wagner, D. R. & Kay, S. A., 1996, In: Science. 274, 5288, p. 790-2 3 p.

    Research output: Contribution to journalArticlepeer-review

  42. Conditional circadian regulation of PHYTOCHROME A gene expression

    Hall, A., Kozma-Bognár, L., Tóth, R., Nagy, F. & Millar, A. J., 2001, In: Plant physiology. 127, 4, p. 1808-18 11 p.

    Research output: Contribution to journalArticlepeer-review

  43. Consistent robustness analysis (CRA) identifies biologically relevant properties of regulatory network models

    Saithong, T., Painter, K. J. & Millar, A. J., Dec 2010, In: PLoS ONE. 5, 12, 11 p., e15589.

    Research output: Contribution to journalArticlepeer-review

  44. Correction: Multiscale digital Arabidopsis predicts individual organ and whole-organism growth

    Chew, Y. H., Wenden, B., Flis, A., Mengin, V., Taylor, J., Davey, C. L., Tindal, C., Thomas, H., Ougham, H. J., De Reffye, P., Stitt, M., Williams, M., Muetzelfeldt, R., Halliday, K. J. & Millar, A. J., 12 May 2015, In: Proceedings of the National Academy of Sciences (PNAS). 112, 19, E2556.

    Research output: Contribution to journalArticlepeer-review

  45. Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform

    Marshall-colon, A., Long, S. P., Allen, D. K., Allen, G., Beard, D. A., Benes, B., Von Caemmerer, S., Christensen, A. J., Cox, D. J., Hart, J. C., Hirst, P. M., Kannan, K., Katz, D. S., Lynch, J. P., Millar, A. J., Panneerselvam, B., Price, N. D., Prusinkiewicz, P., Raila, D., Shekar, R. G. & 9 others, Shrivastava, S., Shukla, D., Srinivasan, V., Stitt, M., Turk, M. J., Voit, E. O., Wang, Y., Yin, X. & Zhu, X., 15 May 2017, In: Frontiers in plant science. 8, 786.

    Research output: Contribution to journalArticlepeer-review

  46. Data assimilation constrains new connections and components in a complex, eukaryotic circadian clock model

    Pokhilko, A., Hodge, S. K., Stratford, K., Knox, K., Edwards, K. D., Thomson, A. W., Mizuno, T. & Millar, A. J., 21 Sep 2010, In: Molecular Systems Biology. 6, 10 p., 416.

    Research output: Contribution to journalArticlepeer-review

  47. Defining the robust behaviour of the plant clock gene circuit with absolute RNA timeseries and open infrastructure

    Flis, A., Fernández, A. P., Zielinski, T., Mengin, V., Sulpice, R., Stratford, K., Hume, A., Pokhilko, A., Southern, M. M., Seaton, D. D., McWatters, H. G., Stitt, M., Halliday, K. J. & Millar, A. J., 14 Oct 2015, In: Open Biology. 5, 10, 150042.

    Research output: Contribution to journalArticlepeer-review

  48. Design principles underlying circadian clocks

    Rand, D. A., Shulgin, B. V., Salazar, D. & Millar, A. J., 2004, In: Journal of the Royal Society Interface. 1, 1, p. 119-30 12 p.

    Research output: Contribution to journalArticlepeer-review

  49. Detection and resolution of genetic loci affecting circadian period in Brassica oleracea

    Salathia, N., Lynn, J. R., Millar, A. J. & King, G. J., 2007, In: TAG Theoretical and Applied Genetics. 114, 4, p. 683-92 10 p.

    Research output: Contribution to journalArticlepeer-review

  50. Development of a Novel Biosensor for the Detection of Arsenic in Drinking Water

    Aleksic, J., Bizzari, F., Cai, Y., Davidson, B., Mora, K. D., Ivakhno, S., Seshasayee, S. L., Nicholson, J., Wilson, J., Elfick, A., French, C., Kozma-Bognar, L., Ma, H. & Millar, A., 2007, In: IET Synthetic Biology. 1, 40940, p. 87-90 4 p.

    Research output: Contribution to journalArticlepeer-review

  51. Digital clocks: simple Boolean models can quantitatively describe circadian systems

    Akman, O. E., Watterson, S., Parton, A., Binns, N., Millar, A. J. & Ghazal, P., 7 Sep 2012, In: Journal of the Royal Society Interface. 9, 74, p. 2365-2382 18 p.

    Research output: Contribution to journalArticlepeer-review

  52. Distinct regulation of CAB and PHYB gene expression by similar circadian clocks

    Hall, A., Kozma-Bognár, L., Bastow, R. M., Nagy, F. & Millar, A. J., 2002, In: The Plant Journal. 32, 4, p. 529-37 9 p.

    Research output: Contribution to journalArticlepeer-review

  53. ELF4 is required for oscillatory properties of the circadian clock

    McWatters, H. G., Kolmos, E., Hall, A., Doyle, M. R., Amasino, R. M., Gyula, P., Nagy, F., Millar, A. J. & Davis, S. J., 2007, In: Plant physiology. 144, 1, p. 391-401 11 p.

    Research output: Contribution to journalArticlepeer-review

  54. Efficient Utility-based Clustering over High Dimensional Partition Spaces

    Liverani, S., Anderson, P. E., Edwards, K. D., Millar, A. J. & Smith, J. Q., 2009, In: Bayesian analysis. 4, 3, p. 539-572 34 p.

    Research output: Contribution to journalArticlepeer-review

  55. Erratum: Digital clocks: Simple Boolean models can quantitatively describe circadian systems (Journal of the Royal Society Interface (2012) 9 (3573) DOI: 10.1098/rsif.2012.0673)

    Akman, O. E., Watterson, S., Parton, A., Binns, N., Millar, A. J. & Ghazal, P., 7 Dec 2012, In: Journal of the Royal Society Interface. 9, 77, p. 3578 1 p.

    Research output: Contribution to journalArticlepeer-review

  56. Expanding the bioluminescent reporter toolkit for plant science with NanoLUC

    Urquiza-garcía, U. & Millar, A. J., 8 Jul 2019, In: Plant Methods. 15, 1, 68.

    Research output: Contribution to journalArticlepeer-review

  57. Experimental validation of a predicted feedback loop in the multi-oscillator clock of Arabidopsis thaliana

    Locke, J. C. W., Kozma-Bognár, L., Gould, P. D., Fehér, B., Kevei, E., Nagy, F., Turner, M. S., Hall, A. & Millar, A. J., 2006, In: Molecular Systems Biology. 2, p. 59

    Research output: Contribution to journalArticlepeer-review

  58. Extension of a genetic network model by iterative experimentation and mathematical analysis

    Locke, J. C. W., Southern, M. M., Kozma-Bognár, L., Hibberd, V., Brown, P. E., Turner, M. S. & Millar, A. J., 28 Jun 2005, In: Molecular Systems Biology. 1, 9 p., 2005.0013.

    Research output: Contribution to journalArticlepeer-review

  59. FKF1 conveys timing information for CONSTANS stabilization in photoperiodic flowering

    Song, Y. H., Smith, R. W., To, B. J., Millar, A. J. & Imaizumi, T., 2012, In: Science. 336, 6084, p. 1045-1049 5 p.

    Research output: Contribution to journalArticlepeer-review

  60. FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock

    Edwards, K. D., Anderson, P. E., Hall, A., Salathia, N. S., Locke, J. C. W., Lynn, J. R., Straume, M., Smith, J. Q. & Millar, A. J., 2006, In: The Plant Cell. 18, 3, p. 639-650 12 p.

    Research output: Contribution to journalArticlepeer-review

  61. FLOWERING LOCUS C-dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways

    Salathia, N., Davis, S. J., Lynn, J. R., Michaels, S. D., Amasino, R. M. & Millar, A. J., 2006, In: BMC Plant Biology. 6, 10.

    Research output: Contribution to journalArticlepeer-review

  62. Firefly luciferase as a reporter of regulated gene expression in higher plants

    Millar, A. J., Short, S. R., Hiratsuka, K., Chua, N. & Kay, S. A., 1 Nov 1992, In: Plant Molecular Biology Reporter. 10, 4, p. 324-337

    Research output: Contribution to journalArticlepeer-review

  63. Firefly luciferase as a reporter of regulated gene expression in plants

    Millar, A., 1992, In: Plant Molecular Biology Reporter. 10, p. 324-337 14 p.

    Research output: Contribution to journalArticlepeer-review

  64. Forward genetic analysis of the circadian clock separates the multiple functions of ZEITLUPE

    Kevei, E., Gyula, P., Hall, A., Kozma-Bognár, L., Kim, W-Y., Eriksson, M. E., Tóth, R., Hanano, S., Fehér, B., Southern, M. M., Bastow, R. M., Viczián, A., Hibberd, V., Davis, S. J., Somers, D. E., Nagy, F. & Millar, A. J., 2006, In: Plant physiology. 140, 3, p. 933-45 13 p.

    Research output: Contribution to journalArticlepeer-review

  65. Full genome re-sequencing reveals a novel circadian clock mutation in Arabidopsis

    Ashelford, K., Eriksson, M. E., Allen, C. M., D'Amore, R., Johansson, M., Gould, P., Kay, S., Millar, A. J., Hall, N. & Hall, A., 2011, In: Genome Biology. 12, 3, p. R28

    Research output: Contribution to journalArticlepeer-review

  66. Functional analysis of Casein Kinase 1 in a minimal circadian system

    van Ooijen, G., Hindle, M., Martin, S. F., Barrios-Llerena, M., Sanchez, F., Bouget, F-Y., O'Neill, J. S., Le Bihan, T. & Millar, A. J., 2013, In: PLoS ONE. 8, 7, e70021.

    Research output: Contribution to journalArticlepeer-review

  67. Functional analysis of the rodent CK1tau mutation in the circadian clock of a marine unicellular alga

    van Ooijen, G., Martin, S. F., Barrios-Llerena, M. E., Hindle, M., Le Bihan, T., O'Neill, J. S. & Millar, A. J., 15 Oct 2013, In: BMC Cell Biology. 14, 1, 46.

    Research output: Contribution to journalArticlepeer-review

  68. Functional characterization of phytochrome interacting factor 3 for the Arabidopsis thaliana circadian clockwork

    Viczián, A., Kircher, S., Fejes, E., Millar, A. J., Schäfer, E., Kozma-Bognár, L. & Nagy, F., 2005, In: Plant and cell physiology. 46, 10, p. 1591-602 12 p.

    Research output: Contribution to journalArticlepeer-review

  69. Functional independence of circadian clocks that regulate plant gene expression

    Thain, S. C., Hall, A. & Millar, A. J., 2000, In: Current biology : CB. 10, 16, p. 951-6 6 p.

    Research output: Contribution to journalArticlepeer-review

  70. Genomic Transformation of the Picoeukaryote Ostreococcus tauri

    van Ooijen, G., Knox, K., Kis, K., Bouget, F-Y. & Millar, A. J., 2012, In: Journal of Visualized Experiments (JoVE). 65, e4074.

    Research output: Contribution to journalArticlepeer-review

  71. Guidelines for Genome-Scale Analysis of Biological Rhythms

    Hughes, M. E., Abruzzi, K. C., Allada, R., Anafi, R., Arpat, A. B., Asher, G., Baldi, P., de Bekker, C., Bell-Pedersen, D., Blau, J., Brown, S., Ceriani, M. F., Chen, Z., Chiu, J. C., Cox, J., Crowell, A. M., DeBruyne, J. P., Dijk, D-J., DiTacchio, L., Doyle, F. J. & 73 others, Duffield, G. E., Dunlap, J. C., Eckel-Mahan, K., Esser, K. A., FitzGerald, G. A., Forger, D. B., Francey, L. J., Fu, Y-H., Gachon, F., Gatfield, D., de Goede, P., Golden, S. S., Green, C., Harer, J., Harmer, S., Haspel, J., Hastings, M. H., Herzel, H., Herzog, E. D., Hoffmann, C., Hong, C., Hughey, J. J., Hurley, J. M., de la Iglesia, H. O., Johnson, C., Kay, S. A., Koike, N., Kornacker, K., Kramer, A., Lamia, K., Leise, T., Lewis, S. A., Li, J., Li, X., Liu, A. C., Loros, J. J., Martino, T. A., Menet, J. S., Merrow, M., Millar, A. J., Mockler, T., Naef, F., Nagoshi, E., Nitabach, M. N., Olmedo, M., Nusinow, D. A., Ptáček, L. J., Rand, D., Reddy, A. B., Robles, M. S., Roenneberg, T., Rosbash, M., Ruben, M. D., Rund, S. S. C., Sancar, A., Sassone-Corsi, P., Sehgal, A., Sherrill-Mix, S., Skene, D. J., Storch, K-F., Takahashi, J. S., Ueda, H. R., Wang, H., Weitz, C., Westermark, P. O., Wijnen, H., Xu, Y., Wu, G., Yoo, S-H., Young, M., Zhang, E. E., Zielinski, T. & Hogenesch, J. B., 1 Oct 2017, In: Journal of biological rhythms. 32, 5, p. 380-393 14 p., 748730417728663.

    Research output: Contribution to journalArticlepeer-review

  72. HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 Is Required for Circadian Periodicity through the Promotion of Nucleo-Cytoplasmic mRNA Export in Arabidopsis

    Macgregor, D. R., Gould, P., Foreman, J., Griffiths, J., Bird, S., Page, R., Stewart, K., Steel, G., Young, J., Paszkiewicz, K., Millar, A. J., Halliday, K. J., Hall, A. J. & Penfield, S., 19 Nov 2013, In: The Plant Cell. 14 p.

    Research output: Contribution to journalArticlepeer-review

  73. How plants tell the time

    Murtas, G. & Millar, A. J., 2000, In: Current opinion in plant biology. 3, 1, p. 43-6 4 p.

    Research output: Contribution to journalArticlepeer-review

  74. Hybrid regulatory models: a statistically tractable approach to model regulatory network dynamics

    Ocone, A., Millar, A. J. & Sanguinetti, G., 2013, In: Bioinformatics. 29, 7, p. 910-916 7 p.

    Research output: Contribution to journalArticlepeer-review

  75. Independent action of ELF3 and phyB to control hypocotyl elongation and flowering time

    Reed, J. W., Nagpal, P., Bastow, R. M., Solomon, K. S., Dowson-Day, M. J., Elumalai, R. P. & Millar, A. J., 2000, In: Plant physiology. 122, 4, p. 1149-60 12 p.

    Research output: Contribution to journalArticlepeer-review

  76. Input signals to the plant circadian clock

    Millar, A. J., 2004, In: Journal of Experimental Botany. 55, 395, p. 277-83 7 p.

    Research output: Contribution to journalArticlepeer-review

  77. Integration of circadian and phototransduction pathways in the network controlling CAB gene transcription in Arabidopsis

    Millar, A. J. & Kay, S. A., 1996, In: Proceedings of the National Academy of Sciences (PNAS). 93, 26, p. 15491-6 6 p.

    Research output: Contribution to journalArticlepeer-review

  78. Isoform switching facilitates period control in the Neurospora crassa circadian clock

    Akman, O. E., Locke, J. C. W., Tang, S., Carré, I., Millar, A. J. & Rand, D. A., Feb 2008, In: Molecular Systems Biology. 4, 11 p., 164.

    Research output: Contribution to journalArticlepeer-review

  79. Isoform switching facilitates period control in the Neurospora crassa circadian clock - Corrigendum

    Akman, O. E., Locke, J. C. W., Tang, S., Carre, I., Millar, A. J. & Rand, D. A., Apr 2008, In: Molecular Systems Biology. 4, p. - 1 p., 186.

    Research output: Contribution to journalArticlepeer-review

  80. Label-free quantitative analysis of the casein kinase 2-responsive phosphoproteome of the marine minimal model species Ostreococcus tauri

    Bihan, T. L., Hindle, M., Martin, S. F., Barrios-Llerena, M. E., Krahmer, J., Kis, K., Millar, A. J. & van Ooijen, G., 2015, In: Proteomics. 15, 23-24, p. 4135–4144

    Research output: Contribution to journalArticlepeer-review

  81. Light and circadian regulation of clock components aids flexible responses to environmental signals

    Dixon, L. E., Hodge, S. K., van Ooijen, G., Troein, C., Akman, O. E. & Millar, A. J., 20 May 2014, In: New Phytologist.

    Research output: Contribution to journalArticlepeer-review

  82. Light inputs shape the Arabidopsis circadian system

    Wenden, B., Kozma-Bognár, L., Edwards, K. D., Hall, A. J. W., Locke, J. C. W. & Millar, A. J., 31 May 2011, In: The Plant Journal. 66, 3, p. 480-491 12 p.

    Research output: Contribution to journalArticlepeer-review

  83. Light responses of a plastic plant

    Millar, A. J., 2001, In: Nature Genetics. 29, 4, p. 357-8 2 p.

    Research output: Contribution to journalArticlepeer-review

  84. Linked circadian outputs control elongation growth and flowering in response to photoperiod and temperature

    Seaton, D. D., Smith, R. W., Song, Y. H., MacGregor, D. R., Stewart, K., Steel, G., Foreman, J., Penfield, S., Imaizumi, T., Millar, A. J. & Halliday, K. J., 19 Jan 2015, In: Molecular Systems Biology. 11, 1, 19 p., 776.

    Research output: Contribution to journalArticlepeer-review

  85. Mapping the Core of the Arabidopsis Circadian Clock Defines the Network Structure of the Oscillator

    Huang, W., Pérez-García, P., Pokhilko, A., Millar, A. J., Antoshechkin, I., Riechmann, J. L. & Mas, P., 6 Apr 2012, In: Science. 336, 6077, p. 75-79 5 p.

    Research output: Contribution to journalArticlepeer-review

  86. Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus

    Sorokina, O., Corellou, F., Dauvillée, D., Sorokin, A., Goryanin, I., Ball, S., Bouget, F-Y. & Millar, A. J., 2011, In: BMC Systems Biology. 5, 36, 16 p.

    Research output: Contribution to journalArticlepeer-review

  87. Model selection reveals control of cold signalling by evening-phased components of the plant circadian clock

    Keily, J., MacGregor, D. R., Smith, R. W., Millar, A. J., Halliday, K. J. & Penfield, S., 31 Oct 2013, In: The Plant Journal. 76, 2, p. 247-57 11 p.

    Research output: Contribution to journalArticlepeer-review

  88. Modelling genetic networks with noisy and varied experimental data: the circadian clock in Arabidopsis thaliana

    Locke, J. C. W., Millar, A. J. & Turner, M. S., 2005, In: Journal of Theoretical Biology. 234, 3, p. 383-93 11 p.

    Research output: Contribution to journalArticlepeer-review

  89. Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler

    Grzegorczyk, M., Husmeier, D., Edwards, K. D., Ghazal, P. & Millar, A. J., 15 Sep 2008, In: Bioinformatics. 24, 18, p. 2071-2078 8 p.

    Research output: Contribution to journalArticlepeer-review

  90. Modelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputs

    Pokhilko, A., Mas, P. & Millar, A. J., 2013, In: BMC Systems Biology. 7, 1, 12 p., 23.

    Research output: Contribution to journalArticlepeer-review

  91. Molecular basis of flowering under natural long-day conditions in Arabidopsis

    Song, Y. H., Kubota, A., Kwon, M. S., Covington, M. F., Lee, N., Taagen, E. R., Laboy Cintrón, D., Hwang, D. Y., Akiyama, R., Hodge, S. K., Huang, H., Nguyen, N. H., Nusinow, D. A., Millar, A. J., Shimizu, K. K. & Imaizumi, T., 1 Oct 2018, In: Nature Plants. 4, 10, p. 824-835 12 p.

    Research output: Contribution to journalArticlepeer-review

  92. Molecular intrigue between phototransduction and the circadian clock

    Millar, A. J., May 1998, In: Annals of Botany. 81, 5, p. 581-587 7 p.

    Research output: Contribution to journalArticlepeer-review

  93. Multiple circadian clock outputs regulate diel turnover of carbon and nitrogen reserves

    Flis, A., Mengin, V., Ivakov, A. A., Mugford, S. T., Hubberten, H-M., Encke, B., Krohn, N., Höhne, M., Feil, R., Hoefgen, R., Lunn, J. E., Millar, A. J., Smith, A. M., Sulpice, R. & Stitt, M., 1 Feb 2019, In: Plant, Cell and Environment. 42, 2, p. 549-573 25 p.

    Research output: Contribution to journalArticlepeer-review

  94. Multiple light inputs to a simple clock circuit allow complex biological rhythms

    Troein, C., Corellou, F., Dixon, L. E., van Ooijen, G., O'Neill, J. S., Bouget, F-Y. & Millar, A. J., 2011, In: The Plant Journal. 66, 2, p. 375-85 11 p.

    Research output: Contribution to journalArticlepeer-review

  95. Multiscale digital Arabidopsis predicts individual organ and whole-organism growth

    Chew, Y. H., Wenden, B., Flis, A., Mengin, V., Taylor, J., Davey, C. L., Tindal, C., Thomas, H., Ougham, H. J., De Reffye, P., Stitt, M., Williams, M., Muetzelfeldt, R., Halliday, K. J. & Millar, A. J., 30 Sep 2014, In: Proceedings of the National Academy of Sciences (PNAS). 111, 39, p. E4127-E4136 10 p.

    Research output: Contribution to journalArticlepeer-review

  96. Natural allelic variation identifies new genes in the Arabidopsis circadian system

    Swarup, K., Alonso-Blanco, C., Lynn, J. R., Michaels, S. D., Amasino, R. M., Koornneef, M. & Millar, A. J., 1999, In: The Plant Journal. 20, 1, p. 67-77 11 p.

    Research output: Contribution to journalArticlepeer-review

  97. Natural allelic variation in the temperature-compensation mechanisms of the Arabidopsis thaliana circadian clock

    Edwards, K. D., Lynn, J. R., Gyula, P., Nagy, F. & Millar, A. J., 2005, In: Genetics. 170, 1, p. 387-400 14 p.

    Research output: Contribution to journalArticlepeer-review

  98. Network balance via CRY signalling controls the Arabidopsis circadian clock over ambient temperatures

    Gould, P. D., Ugarte, N., Domijan, M., Costa, M., Foreman, J., Macgregor, D., Rose, K., Griffiths, J., Millar, A. J., Finkenstädt, B., Penfield, S., Rand, D. A., Halliday, K. J. & Hall, A. J. W., 2013, In: Molecular Systems Biology. 9, 650.

    Research output: Contribution to journalArticlepeer-review

  99. New models in vogue for circadian clocks

    Kay, S. A. & Millar, A. J., 1995, In: Cell. 83, 3, p. 361-4 4 p.

    Research output: Contribution to journalArticlepeer-review

  100. Non-transcriptional oscillators in circadian timekeeping

    van Ooijen, G. & Millar, A. J., 1 Nov 2012, In: Trends in biochemical sciences. 37, 11, p. 484-492 9 p.

    Research output: Contribution to journalArticlepeer-review

  101. Organ specificity in the plant circadian system is explained by different light inputs to the shoot and root clocks

    Bordage, S., Sullivan, S., Laird, J., Millar, A. J. & Nimmo, H. G., 1 Oct 2016, In: New Phytologist. 212, 1, p. 136–149 14 p.

    Research output: Contribution to journalArticlepeer-review

  102. Partners in time: EARLY BIRD associates with ZEITLUPE and regulates the speed of the Arabidopsis clock

    Johansson, M., McWatters, H. G., Bakó, L., Takata, N., Gyula, P., Hall, A., Somers, D. E., Millar, A. J. & Eriksson, M. E., 2011, In: Plant physiology. 155, 4, p. 2108-22 15 p.

    Research output: Contribution to journalArticlepeer-review

  103. Peroxiredoxins are conserved markers of circadian rhythms

    Edgar, R. S., Green, E. W., Zhao, Y., van Ooijen, G., Olmedo, M., Qin, X., Xu, Y., Pan, M., Valekunja, U. K., Feeney, K. A., Maywood, E. S., Hastings, M. H., Baliga, N. S., Merrow, M., Millar, A. J., Johnson, C. H., Kyriacou, C. P., O'Neill, J. S. & Reddy, A. B., 2012, In: Nature. 485, 7399, p. 459-464 6 p.

    Research output: Contribution to journalArticlepeer-review

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