Edinburgh Research Explorer

Prof Andrew Rambaut

Personal Chair in Molecular Evolution

  1. 2018
  2. Active Ebola Virus Replication and Heterogeneous Evolutionary Rates in EVD Survivors

    Whitmer, S. L. M., Ladner, J. T., Wiley, M. R., Patel, K. J., Dudas, G., Rambaut, A., Sahr, F., Prieto, K., Shepard, S. S., Carmody, E., Knust, B., Naidoo, D., Deen, G., Formenty, P., Nichol, S. T., Palacios, G. F., Ströher, U. & Ebola Virus Persistence Study Group 30 Jan 2018 In : Cell Reports. 22, 5, p. 1159-1168 10 p.

    Research output: Contribution to journalArticle

  3. MERS-CoV spillover at the camel-human interface

    Dudas, G., Carvalho, L. M., Rambaut, A. & Bedford, T. 16 Jan 2018 In : eLIFE. 7

    Research output: Contribution to journalArticle

  4. 2017
  5. Genome-wide evolutionary dynamics of influenza B viruses on a global scale

    Langat, P., Raghwani, J., Dudas, G., Bowden, T. A., Edwards, S., Gall, A., Bedford, T., Rambaut, A., Daniels, R. S., Russell, C. A., Pybus, O. G., McCauley, J., Kellam, P. & Watson, S. J. Dec 2017 In : PLoS Pathogens. 13, 12, p. e1006749

    Research output: Contribution to journalArticle

  6. Lorenzo-Redondo et al. reply

    Lorenzo-Redondo, R., Fryer, H. R., Bedford, T., Kim, E-Y., Archer, J., Pond, S. L. K., Chung, Y-S., Penugonda, S., Chipman, J. G., Fletcher, C. V., Schacker, T. W., Malim, M. H., Rambaut, A., Haase, A. T., McLean, A. R. & Wolinsky, S. M. 22 Nov 2017 In : Nature. 551, 7681, p. E10

    Research output: Contribution to journalComment/debate

  7. Adaptive MCMC in Bayesian phylogenetics: an application to analyzing partitioned data in BEAST

    Baele, G., Lemey, P., Rambaut, A. & Suchard, M. A. 15 Jun 2017 In : Bioinformatics.

    Research output: Contribution to journalArticle

  8. Establishment and cryptic transmission of Zika virus in Brazil and the Americas

    Rambaut, A. & 71 others Faria, N. R., Quick, J., Morales, I., Theze, J., Jesus, J. G., Giovanetti, M., Kraemer, M. U. G., Hill, S. C., Black, A., da Costa, A. C., Silva, S. P., Raghwani, J., Cauchemez, S., du Plessis, L., Verotti, M. P., de Oliveira, W. K., Carmo, E. H., Coelho, G. E., Santelli, A. C. F. S., Vinhal, L. C., Henriques, C. M., Simpson, J. T., Loose, M., Anderson, K. G., Grubaugh, N. D., Somasekar, S., Chiu, C. Y., Munoz-Medina, J. E., Gonzalez-Bonilla, C. R., Arias, C. F., Lewis-Ximenez, L. L., Baylis, S. A., Chieppe, A. O., Aguiar, S. F., Fernandes, C. A., Lemos, P. S., Nascimento, B. L. S., Monteiro, H. A. O., Siqueira, I. C., de Queiroz, M. G., de Souza, T. R., Bezerra, J. F., Lemos, M. R., Pereira, G. F., Loudal, D., Moura, L. C., Dhalia, R., Franca, R. F., Magalhaes, T., Marques, E. T. J., Jaenisch, T., Wallau, G. L., de Lima, M. C., Nascimento, V., de Cerqueira, E. M., de Lima, M. M., Mascarenhas, D. L., Moura Neto, J. P., Levin, A. S., Tozetto-Mendoza, T. R., Fonseca, S. N., Mendes-Correa, M. C., Milagres, F. P., Segurado, A., Holmes, E. C., Bedford, T., Nunes, M. R. T., Sabino, E. C., Alcantara, L. C. J., Loman, N. & Pybus, O. G. 15 Jun 2017 In : Nature.

    Research output: Contribution to journalArticle

  9. Genome sequencing reveals Zika virus diversity and spread in the Americas

    Rambaut, A. & 59 others Metsky, H. C., Matranga, C. B., Wohl, S., Schaffner, S. F., Freije, C. A., Winnicki, S., West, K., Qu, J., Baniecki, M. L., Gladden-Young, A., Lin, A. E., Christopher, T-T., Ye, S. H., Park, D. J., Luo, C., Barnes, K. G., Shah, R. R., Chak, B., Barbosa-Lima, G., Delatorre, E., Vieira, Y. R., Paul, L. M., Tan, A. L., Barcellona, C. M., Porcelli, M. C., Vasquez, C., Cannons, A. C., Cone, M. R., Hogan, K. N., Kopp IV, E. W., Anzinger, J. J., Garcia, K. F., Parhap, L. A., Gelvez Ramirez, R. M., Montoya, M., Rojas, D. P., Brown, C. M., Hennigan, S., Sabina, B., Scotland, S., Gangavarapu, K., Grubaugh, N. D., Oliveira, G., Robles-Sikisaka, R., Gehrke, L., Smole, S., Halloran, M. E., Villar Centeno, L. A., Mattar, S., Lorenzana, I., Cerbino-Neto, J., Valim, C., Degrave, W., Bozza, P. T., Souza, T. M. L., Bosch, I., Yozwiak, N. L., MacInnis, B. L. & Sabeti, P. C. 24 May 2017 In : Nature.

    Research output: Contribution to journalArticle

  10. Genomic epidemiology reveals multiple introductions of Zika virus into the United States

    Rambaut, A. & 68 others Grubaugh, N. D., Ladner, J. T., Kraemer, M. U. G., Dudas, G., Tan, A. L., Gangavarapu, K., Wiley, M. R., White, S., Theze, J., Magnani, D. M., Prieto, K., Reyes, D., Bingham, A., Paul, L. M., Robles-Sikisaka, R., Oliveira, G., Pronty, D., Barcellona, C. M., Metsky, H. C., Baniecki, M. L., Barnes, K. G., Chak, B., Freije, C. A., Gladden-Young, A., Gnirke, A., Luo, C., MacInnis, B., Matranga, C. B., Park, D. J., Qu, J., Schaffner, S. F., Christopher, T-T., West, K. L., Winnicki, S. M., Wohl, S., Yozwiak, N. L., Quick, J., Fauver, J. R., Khan, K., Brent, S. E., Reiner Jr, R. C., Lichtenberger, P. N., Ricciardi, M., Bailey, V. K., Watkins, D. I., Cone, M. R., Kopp IV, E. W., Hogan, K. N., Cannons, A. C., Jean, R., Monaghan, A. J., Garry, R. F., Loman, N. J., Faria, N. R., Porcelli, M. C., Vasquez, C., Nagle, E. R., Cummings, D. A. T., Stanek, D., Sanchez-Lockhart, M., Sabeti, P. C., Gillis, L. D., Michael, S. F., Bedford, T., Pybus, O. G., Isern, S., Palacios, G. F. & Andersen, K. G. 24 May 2017 In : Nature.

    Research output: Contribution to journalArticle

  11. Virus genomes reveal factors that spread and sustained the Ebola epidemic

    Rambaut, A. & 73 others Dudas, G., Carvalho, L. M., Bedford, T., Tatem, A. J., Baele, G., Faria, N. R., Park, D. J., Ladner, J. T., Arias, A., Asogun, D., Bielejec, F., Caddy, S., Cotten, M., D'ambrozio, J., Dellicour, S., Di Caro, A., Diclaro II, J. W., Duraffour, S., Elmore, M. J., Fakoli III, L. S., Faye, O., Gilbert, M. L., Gevao, S. M., Gire, S. K., Gladden-Young, A., Gnirke, A., Goba, A., Grant, D. S., Haagmans, B. L., Hiscox, J. A., Jah, U., Kargbo, B., Kugelman, J. R., Liu, D., Malboeuf, C. M., Mate, S., Matthews, D. A., Matranga, C. B., Meredith, L. W., Qu, J., Quick, J., Pas, S. D., Phan, M. V. T., Pollakis, G., Reusken, C. B., Sanchez-Lockhart, M., Schaffner, S. F., Schieffelin, J. S., Sealfon, R. S., Simon-Loriere, E., Smits, S. L., Stoecker, K., Thorne, L., Tobin, E. A., Vandi, M. A., Watson, S. J., West, K., Whitmer, S. L. M., Wiley, M. R., Winnicki, S. M., Wohl, S., Wölfel, R., Yozwiak, N. L., Andersen, K. G., Blyden, S. O., Bolay, F. K., Carroll, M. W., Dahn, B., Diallo, B., Formenty, P., Fraser, C., Suchard, M. A. & Lemey, P. 12 Apr 2017 In : Nature.

    Research output: Contribution to journalArticle

  12. Bayesian nonparametric clustering in phylogenetics: modeling antigenic evolution in influenza

    Cybis, G. B., Sinsheimer, J. S., Bedford, T., Rambaut, A., Lemey, P. & Suchard, M. A. 18 Jan 2017 In : STATISTICS IN MEDICINE.

    Research output: Contribution to journalArticle

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