Edinburgh Research Explorer

Prof Andrew Rambaut

Personal Chair in Molecular Evolution

  1. 2019
  2. Metagenomic next-generation sequencing of the 2014 Ebola Virus disease outbreak in the Democratic Republic of the Congo

    Li, T., Mbala-Kingebeni, P., Naccache, S. N., Thézé, J., Bouquet, J., Federman, S., Somasekar, S., Yu, G., Sanchez-San Martin, C., Achari, A., Schneider, B. S., Rimoin, A. W., Rambaut, A., Nsio, J., Mulembakani, P., Ahuka-Mundeke, S., Kapetshi, J., Pybus, O. G., Muyembe-Tamfum, J-J. & Chiu, C. Y., 26 Aug 2019, In : Journal of Clinical Microbiology. 57, 9

    Research output: Contribution to journalArticle

  3. High-performance computing in Bayesian Phylogenetics and Phylodynamics using BEAGLE

    Baele, G., Ayres, D. L., Rambaut, A., Suchard, M. A. & Lemey, P., 6 Jul 2019, Evolutionary Genomics: Statistical and Computational Methods. 2nd ed. Springer, Vol. 1910. p. 691-722 (Methods in Molecular Biology).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  4. BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics

    Ayres, D. L., Cummings, M. P., Baele, G., Darling, A. E., Lewis, P. O., Swofford, D. L., Huelsenbeck, J. P., Lemey, P., Rambaut, A. & Suchard, M. A., 23 Apr 2019, In : Systematic biology. 10 p.

    Research output: Contribution to journalArticle

  5. Bayesian inference of evolutionary histories under time-dependent substitution rates

    Membrebe, J. V., Suchard, M. A., Rambaut, A., Baele, G. & Lemey, P., 19 Apr 2019, In : Molecular Biology and Evolution. 11 p.

    Research output: Contribution to journalArticle

  6. BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

    Bouckaert, R., Vaughan, T. G., Barido-Sottani, J., Duchêne, S., Fourment, M., Gavryushkina, A., Heled, J., Jones, G., Kühnert, D., De Maio, N., Matschiner, M., Mendes, F. K., Müller, N. F., Ogilvie, H. A., du Plessis, L., Popinga, A., Rambaut, A., Rasmussen, D., Siveroni, I., Suchard, M. A. & 5 others, Wu, C-H., Xie, D., Zhang, C., Stadler, T. & Drummond, A. J., 8 Apr 2019, In : PLoS Computational Biology. 15, 4, p. e1006650 28 p.

    Research output: Contribution to journalArticle

  7. Tracking virus outbreaks in the twenty-first century

    Grubaugh, N. D., Ladner, J. T., Lemey, P., Pybus, O. G., Rambaut, A., Holmes, E. C. & Andersen, K. G., 1 Jan 2019, In : Nature Microbiology. 4, 1, p. 10-19 10 p.

    Research output: Contribution to journalReview article

  8. 2018
  9. Pandemics: Spend on surveillance, not prediction

    Holmes, E. C., Rambaut, A. & Andersen, K. G., 14 Jun 2018, In : Nature. 558, p. 180-182

    Research output: Contribution to journalComment/debate

  10. Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

    Suchard, M. A., Lemey, P., Baele, G., Ayres, D. L., Drummond, A. J. & Rambaut, A., 8 Jun 2018, In : Virus Evolution. 4, 1, p. vey016 5 p.

    Research output: Contribution to journalArticle

  11. Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

    Dellicour, S., Baele, G., Dudas, G., Faria, N. R., Pybus, O. G., Suchard, M. A., Rambaut, A. & Lemey, P., 8 Jun 2018, In : Nature Communications. 9, 1, 9 p., 2222.

    Research output: Contribution to journalArticle

  12. Posterior summarisation in Bayesian phylogenetics using Tracer 1.7

    Rambaut, A., Drummond, A. J., Xie, D., Baele, G. & Suchard, M. A., 27 Apr 2018, In : Systematic biology. 67, p. 901–904 4 p.

    Research output: Contribution to journalArticle

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