Edinburgh Research Explorer

Prof David Gally

Personal Chair of Microbial Genetics

  1. 2020
  2. Resistance to change: AMR gene dynamics on a commercial pig farm with high antimicrobial usage

    Pollock, J., Muwonge, A., Hutchings, M. R., Mainda, G., Bronsvoort, M., Gally, D. & Corbishley, A., 3 Feb 2020, In : Scientific Reports. 10, 1708.

    Research output: Contribution to journalArticle

  3. 2019
  4. A guide to machine learning for bacterial host attribution using genome sequence data

    Lupolova, N., Lycett, S. & Gally, D., 28 Nov 2019, In : Microbial Genomics.

    Research output: Contribution to journalArticle

  5. Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids

    Fitzgerald, S. F., Beckett, A. E., Palarea-Albaladejo, J., McAteer, S., Shaaban, S., Morgan, J., Ahmad, N. I., Young, R., Mabbott, N. A., Morrison, L., Bono, J. L., Gally, D. L. & McNeilly, T. N., 3 Oct 2019, In : Plos pathogens. 15, 10, p. e1008003

    Research output: Contribution to journalArticle

  6. Changes in the ileal, but not fecal, microbiome in response to increased dietary protein level and enterotoxigenic Escherichia coli exposure in pigs

    Pollock, J., Hutchings, M. R., Hutchings, K. E. K., Gally, D. & Houdijk, J. G. M., 19 Jul 2019, In : Applied and Environmental Microbiology.

    Research output: Contribution to journalArticle

  7. Whole Genome Sequence Analysis Reveals Lower Diversity and Frequency of Acquired Antimicrobial Resistance (AMR) Genes in E. coli From Dairy Herds Compared With Human Isolates From the Same Region of Central Zambia

    Mainda, G., Lupolova, N., Sikakwa, L., Richardson, E., Bessell, P. R., Malama, S. K., Kwenda, G., Stevens, M. P., Bronsvoort, B. M. D., Muma, J. B. & Gally, D. L., 31 May 2019, In : Frontiers in Microbiology. 10, 1114.

    Research output: Contribution to journalArticle

  8. 2018
  9. Analysis of temporal fecal microbiota dynamics in weaner pigs with and without exposure to enterotoxigenic Escherichia coli

    Pollock, J., Gally, D. L., Glendinning, L., Tiwari, R., Hutchings, M. R. & Houdijk, J. G. M., 7 Sep 2018, In : Journal of Animal Science. 96, 9, p. 3777-3790

    Research output: Contribution to journalArticle

  10. Transposon Insertion Sequencing Elucidates Novel Gene Involvement in Susceptibility and Resistance to Phages T4 and T7 in O157

    Cowley, L. A., Low, A. S., Pickard, D., Boinett, C. J., Dallman, T. J., Day, M., Perry, N., Gally, D. L., Parkhill, J., Jenkins, C. & Cain, A. K., 24 Jul 2018, In : mBio. 9, 4, e00705-18.

    Research output: Contribution to journalArticle

  11. Ribosome maturation by the endoribonuclease YbeY stabilises a type III secretion system transcript required for virulence of enterohemorrhagic

    McAteer, S. P., Sy, B. M., Wong, J. L., Tollervey, D., Gally, D. L. & Tree, J. J., 8 Jun 2018, In : Journal of Biological Chemistry. 293, 23, p. 9006-9016

    Research output: Contribution to journalArticle

  12. Patchy promiscuity: machine learning applied to predict the host specificity of Salmonella enterica and Escherichia coli: Erratum

    Lupolova, N., Dallman, T. J., Holden, N. J. & Gally, D. L., 6 Jun 2018, In : Microbial Genomics. 4, 6

    Research output: Contribution to journalComment/debate

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