Edinburgh Research Explorer

John Woolliams

(Former employee or visitor)

  1. 2020
  2. The usage of Mate Select, a web-based selection tool for pedigree dogs for promoting sustainable breeding

    Janes, M., Lewis, T., Ilska, J. & Woolliams, J., 19 Oct 2020, In: Canine Medicine and Genetics. 7, 1

    Research output: Contribution to journalArticlepeer-review

  3. Management of Genetic Diversity in the Era of Genomics

    Meuwissen, T. H. E., Sonesson, A. K., Gebregiwergis, G. & Woolliams, J. A., 13 Aug 2020, In: Frontiers in genetics. 11, p. 880

    Research output: Contribution to journalArticlepeer-review

  4. Genomic dissection of maternal, additive and non-additive genetic effects for growth and carcass traits in Nile tilapia

    Joshi, R., Meuwissen, T. H. E., Woolliams, J. A. & Gjøen, H. M., 15 Jan 2020, In: Genetics Selection Evolution. 52, 1, p. 1

    Research output: Contribution to journalArticlepeer-review

  5. 2019
  6. Genetic variation and potential for genetic improvement of cuticle deposition on chicken eggs

    Dunn, I., Woolliams, J., Wilson, P., Icken, W., Cavero, D., Jones, A., Quinlan-Pluck, F., Williams, G., Olori, V. & Bain, M. M., 4 Jun 2019, In: Genetics Selection Evolution.

    Research output: Contribution to journalArticlepeer-review

  7. Genetic differences in host infectivity affect disease spread and survival in epidemics

    Anacleto, O., Cabaleiro, S., Villanueva, B., Saura, M., Houston, R., Woolliams, J. & Wilson, A., 20 Mar 2019, In: Scientific Reports.

    Research output: Contribution to journalArticlepeer-review

  8. Enhancing genetic disease control by selecting for lower host infectivity and susceptibility

    Tsairidou, S., Anacleto, O., Woolliams, J. & Wilson, A., 16 Jan 2019, In: Heredity.

    Research output: Contribution to journalArticlepeer-review

  9. 2018
  10. Can We Breed Cattle for Lower bovine TB Infectivity?

    Tsairidou, S., Allen, A., Banos, G., Coffey, M., Anacleto, O., Byrne, A. W., Skuce, R. A., Glass, E., Woolliams, J. & Wilson, A., 7 Dec 2018, In: Frontiers in Veterinary Science. 5, 8 p., 310.

    Research output: Contribution to journalArticlepeer-review

  11. Impact of genetic selection for increased cattle resistance to bovine tuberculosis on disease transmission dynamics

    Raphaka, K., Sanchez Molano, E., Tsairidou, S., Anacleto, O., Glass, E., Woolliams, J., Wilson, A. & Banos, G., 1 Oct 2018, In: Frontiers in Veterinary Science. 5, 14 p., 237.

    Research output: Contribution to journalArticlepeer-review

  12. Detection of runs of homozygosity in Norwegian Red: Density, criteria and genotyping quality control

    Hillestad, B., Woolliams, J. A., Boison, S. A., Grove, H., Meuwissen, T., Våge, D. I. & Klemetsdal, G., 27 Jul 2018, In: Acta Agriculturae Scandinavica A: Animal Sciences. 67, 3-4, p. 107-116

    Research output: Contribution to journalArticlepeer-review

  13. Selective advantage of implementing optimal contributions selection and timescales for the convergence of long-term genetic contributions

    Howard, D. M., Pong-Wong, R., Knap, P. W., Kremer, V. D. & Woolliams, J. A., 10 May 2018, In: Genetics Selection Evolution. 50, 1, 24.

    Research output: Contribution to journalArticlepeer-review

  14. Evaluation of the methodological quality of studies of the performance of diagnostic tests for bovine tuberculosis using QUADAS

    Downs, S. H., More, S. J., Goodchild, A. V., Whelan, A. O., Abernethy, D. A., Broughan, J. M., Cameron, A., Cook, A. J., Ricardo De La Rua-domenech, R., Greiner, M., Gunn, J., Nuñez-garcia, J., Rhodes, S., Rolfe, S., Sharp, M., Upton, P., Watson, E., Welsh, M., Woolliams, J. A., Clifton-hadley, R. S. & 1 others, Parry, J. E., 1 May 2018, In: Preventive Veterinary Medicine. 153, p. 108-116

    Research output: Contribution to journalArticlepeer-review

  15. Meta-analyses of the sensitivity and specificity of ante-mortem and post-mortem diagnostic tests for bovine tuberculosis in the UK and Ireland

    Nuñez-garcia, J., Downs, S. H., Parry, J. E., Abernethy, D. A., Broughan, J. M., Cameron, A. R., Cook, A. J., De La Rua-domenech, R., Goodchild, A. V., Gunn, J., More, S. J., Rhodes, S., Rolfe, S., Sharp, M., Upton, P. A., Vordermeier, H. M., Watson, E., Welsh, M., Whelan, A. O., Woolliams, J. A. & 2 others, Clifton-hadley, R. S. & Greiner, M., 1 May 2018, In: Preventive Veterinary Medicine. 153, p. 94-107

    Research output: Contribution to journalArticlepeer-review

  16. Methodology and preliminary results of a systematic literature review of ante-mortem and post-mortem diagnostic tests for bovine tuberculosis

    Downs, S. H., Parry, J. E., Upton, P. A., Broughan, J. M., Goodchild, A. V., Nuñez-Garcia, J., Greiner, M., Abernethy, D. A., Cameron, A. R., Cook, A. J., de la Rua-Domenech, R., Gunn, J., Pritchard, E., Rhodes, S., Rolfe, S., Sharp, M., Vordermeier, H. M., Watson, E., Welsh, M., Whelan, A. O. & 3 others, Woolliams, J. A., More, S. J. & Clifton-Hadley, R. S., 1 May 2018, In: Preventive Veterinary Medicine. 153, p. 117-126

    Research output: Contribution to journalArticlepeer-review

  17. An analysis of effects of heterozygosity in dairy cattle for bovine tuberculosis resistance

    Tsairidou, S., Allen, A. R., Pong-Wong, R., McBride, S. H., Wright, D. M., Matika, O., Pooley, C., McDowell, S. W. J., Glass, E., Skuce, R., Bishop, S. & Woolliams, J., Apr 2018, In: Animal Genetics. 49, 2, p. 103-109

    Research output: Contribution to journalArticlepeer-review

  18. Joint genomic prediction of canine hip dysplasia in UK and US Labrador Retrievers

    Hoj-Edwards, S., Woolliams, J., Hickey, J., Blott, S. C., Clements, D., Sanchez Molano, E., Todhunter, R. J. & Wiener, P., 28 Mar 2018, In: Frontiers in genetics. 9, 101.

    Research output: Contribution to journalArticlepeer-review

  19. Maternal, dominance and additive genetic effects in Nile tilapia; influence on growth, fillet yield and body size traits

    Joshi, R., Woolliams, J. A., Meuwissen, T. & Gjøen, H. M., 16 Jan 2018, In: Heredity. 120, 5, p. 452-462

    Research output: Contribution to journalArticlepeer-review

  20. 2017
  21. Use and optimization of different sources of information for genomic prediction

    Ilska, J. J., Meuwissen, T. H. E., Kranis, A. & Woolliams, J. A., 11 Dec 2017, In: Genetics Selection Evolution. 49, 1, 11 p., 90.

    Research output: Contribution to journalArticlepeer-review

  22. Simultaneous fitting of genomic-BLUP and Bayes-C components in a genomic prediction model

    Iheshiulor, O. O. M., Woolliams, J. A., Svendsen, M., Solberg, T. & Meuwissen, T. H. E., 24 Aug 2017, In: Genetics Selection Evolution. 49, 1, p. 63

    Research output: Contribution to journalArticlepeer-review

  23. Genomic data illuminates demography, genetic structure and selection of a popular dog breed

    Wiener, P., Sánchez-Molano, E., Clements, D. N., Woolliams, J. A., Haskell, M. J. & Blott, S. C., 14 Aug 2017, In: BMC Genomics. 18, 1, p. 609

    Research output: Contribution to journalArticlepeer-review

  24. Use of haplotypes to identify regions harbouring lethal recessive variants in pigs

    Howard, D. M., Pong-Wong, R., Knap, P. W. & Woolliams, J. A., 14 Jul 2017, In: Genetics Selection Evolution. 49, 1, p. 57

    Research output: Contribution to journalArticlepeer-review

  25. Fine-mapping host genetic variation underlying outcomes to Mycobacterium bovis infection in dairy cows

    Wilkinson, S., Bishop, S., Allen, A. R., Skuce, R., McBride, S. H., Bermingham, M., Woolliams, J. & Glass, E., 24 Jun 2017, In: BMC Genomics. 18, 1, 477.

    Research output: Contribution to journalArticlepeer-review

  26. Genomic selection from livestock to aquaculture applications

    Woolliams, J. A., 1 Apr 2017, In: Aquaculture. 472, p. 84-84 1 p.

    Research output: Contribution to journalMeeting abstractpeer-review

  27. Genomic Regions Underlying Susceptibility to Bovine Tuberculosis in Holstein-Friesian Cattle

    Raphaka, K., Matika, O., Sanchez Molano, E., Mrode, R., Coffey, M., Riggio, V., Glass, E., Woolliams, J., Bishop, S. & Banos, G., 23 Mar 2017, In: BMC Genetics. 18, 1, p. 27

    Research output: Contribution to journalArticlepeer-review

  28. QTL analysis and genomic selection using RADseq derived markers in Sitka spruce: the potential utility of within family data

    Fuentes Utrilla, P., Goswami, C., Cottrell, J. E., Pong-Wong, R., Law, A., A'Hara, S., Lee, S. & Woolliams, J., 4 Feb 2017, In: Tree Genetics and Genomes. 13, 2, 33.

    Research output: Contribution to journalArticlepeer-review

  29. Genetic evaluation for bovine tuberculosis resistance in dairy cattle

    Banos, G., Winters, M., Mrode, R., Mitchell, A., Bishop, S., Woolliams, J. & Coffey, M., Feb 2017, In: Journal of Dairy Science. 100, 2, p. 1272-1281

    Research output: Contribution to journalArticlepeer-review

  30. Cow genotyping strategies for genomic selection in a small dairy cattle population

    Jenko, J., Wiggans, G. R., Cooper, T. A., Eaglen, S. A. E., de L Luff, W. G., Bichard, M., Pong-Wong, R. & Woolliams, J. A., Jan 2017, In: Journal of Dairy Science. 100, 1, p. 439-452

    Research output: Contribution to journalArticlepeer-review

  31. 2016
  32. Improved genetic profiling of anthropometric traits using a big data approach

    Canela-Xandri, O., Rawlik, K., Woolliams, J. & Tenesa, A., 15 Dec 2016, In: PLoS ONE. 11, 12, e0166755.

    Research output: Contribution to journalArticlepeer-review

  33. Quantitative genetic analysis of the bTB diagnostic single intradermal comparative cervical test (SICCT)

    Tsairidou, S., Brotherstone, S., Coffey, M., Bishop, S. C. & Woolliams, J. A., 24 Nov 2016, In: Genetics Selection Evolution. 48, 1, p. 90

    Research output: Contribution to journalArticlepeer-review

  34. Host genetics of resistance to bovine tuberculosis infection in dairy cows.

    Wilkinson, S., Bishop, S. C., Allen, A. R., McBride, S. H., Skuce, R. A., Bermingham, M., Woolliams, J. A. & Glass, E., Sep 2016, In: Journal of Animal Science. 94, Suppt. 4, p. 157-158 2 p.

    Research output: Contribution to journalMeeting abstractpeer-review

  35. Genome-wide association identify regions underlying bovine tuberculosis resistance in dairy cattle

    Raphaka, K., Matika, O., Sanchez Molano, E., Mrode, R., Coffey, M., Glass, E., Woolliams, J., Riggio, V., Bishop, S. & Banos, G., 29 Aug 2016, p. 188. 1 p.

    Research output: Contribution to conferenceAbstractpeer-review

  36. Genomic evaluation, breed identification, and population structure of Guernsey cattle in North America, Great Britain, and the Isle of Guernsey

    Cooper, T. A., Eaglen, S. A. E., Wiggans, G. R., Jenko, J., Huson, H. J., Morrice, D., Bichard, M., Luff, W. G. D. L. & Woolliams, J., Jul 2016, In: Journal of Dairy Science. 99, 7, p. 5508-5515

    Research output: Contribution to journalArticlepeer-review

  37. Genomic regions underlying bovine tuberculosis resistance in Holstein Friesian dairy cattle

    Raphaka, K., Matika, O., Sanchez Molano, E., Mrode, R., Coffey, M. P., Riggio, V., Glass, E., Woolliams, J. & Banos, G., 6 Apr 2016. 1 p.

    Research output: Contribution to conferenceAbstract

  38. Within- and across-breed genomic prediction using whole-genome sequence and single nucleotide polymorphism panels

    Iheshiulor, O. O. M., Woolliams, J. A., Yu, X., Wellmann, R. & Meuwissen, T. H. E., 19 Feb 2016, In: Genetics Selection Evolution. 48, 1, p. 15

    Research output: Contribution to journalArticlepeer-review

  39. The use of genomic coancestry matrices in the optimisation of contributions to maintain genetic diversity at specific regions of the genome

    Gómez-Romano, F., Villanueva, B., Fernández, J., Woolliams, J. A. & Pong-Wong, R., 13 Jan 2016, In: Genetics Selection Evolution. 48, 1, p. 2

    Research output: Contribution to journalArticlepeer-review

  40. 2015
  41. A new tool called DISSECT for analyzing large genomic datasets using a Big Data approach

    Canela-Xandri, O., Law, A., Gray, A., Woolliams, J. & Tenesa, A., 11 Dec 2015, In: Nature Communications. 6, 10162.

    Research output: Contribution to journalArticlepeer-review

  42. Efficiency of genomic prediction for boar taint reduction in Danish Landrace pigs

    Lukić, B., Pong-Wong, R., Rowe, S. J., de Koning, D. J., Velander, I., Haley, C. S., Archibald, A. L. & Woolliams, J. A., Dec 2015, In: Animal Genetics. 46, 6, p. 607-616

    Research output: Contribution to journalArticlepeer-review

  43. Evaluation of the linkage-disequilibrium method for the estimation of effective population size when generations overlap: an empirical case

    Saura, M., Tenesa, A., Woolliams, J. A., Fernández, A. & Villanueva, B., 11 Nov 2015, In: BMC Genomics. 16, 1, p. 922

    Research output: Contribution to journalArticlepeer-review

  44. A Novel Statistical Model to Estimate Host Genetic Effects Affecting Disease Transmission

    Anacleto, O., Garcia-Cortéz, L. A., Lipschutz-Powell, D., Woolliams, J. & Doeschl-Wilson, A., 1 Nov 2015, In: Genetics. 201, 3, p. 871-884

    Research output: Contribution to journalArticlepeer-review

  45. Erratum to: Potential of promotion of alleles by genome editing to improve quantitative traits in livestock breeding programs

    Jenko, J., Gorjanc, G., Cleveland, M. A., Varshney, R. K., Whitelaw, C. B. A., Woolliams, J. A. & Hickey, J. M., 13 Sep 2015, In: Genetics Selection Evolution. 47, 1, p. 69

    Research output: Contribution to journalComment/debatepeer-review

  46. Dissecting genetic and non-genetic influences on dog personality

    Wiener, P., Warner, J., Lofgren, S. E., Sanchez Molano, E., Clements, D., Woolliams, J., Blott, S. C. & Haskell, M. J., 1 Sep 2015, In: Journal of Veterinary Behavior: Clinical Applications and Research. 10, 5, p. 438

    Research output: Contribution to journalMeeting abstractpeer-review

  47. Hui and Walter's latent-class model extended to estimate diagnostic test properties from surveillance data: a latent model for latent data

    Bermingham, M. L., Handel, I., Glass, E., Woolliams, J., Bronsvoort, M., McBride, S. H., Skuce, R., Allen, A., McDowell, S. W. J. & Bishop, S., 7 Jul 2015, In: Scientific Reports. 5, 11861.

    Research output: Contribution to journalArticlepeer-review

  48. Potential of promotion of alleles by genome editing to improve quantitative traits in livestock breeding programs

    Jenko, J., Gorjanc, G., Cleveland, M. A., Varshney, R. K., Whitelaw, C. B. A., Woolliams, J. A. & Hickey, J. M., 2 Jul 2015, In: Genetics Selection Evolution. 47, 1, 55.

    Research output: Contribution to journalArticlepeer-review

  49. Functional classification of 15 million SNPs detected from diverse chicken populations

    Gheyas, A. A., Boschiero, C., Eory, L., Ralph, H., Kuo, R., Woolliams, J. A. & Burt, D. W., 29 Apr 2015, In: DNA Research. 22, 3, p. 205-217

    Research output: Contribution to journalArticlepeer-review

  50. Genetic contributions and their optimization

    Woolliams, J. A., Berg, P., Dagnachew, B. S. & Meuwissen, T. H. E., 1 Apr 2015, In: Journal of Animal Breeding and Genetics. 132, 2, p. 89-99 11 p.

    Research output: Contribution to journalArticlepeer-review

  51. Genomic prediction of traits related to canine hip dysplasia

    Sanchez Molano, E., Pong-Wong, R., Clements, D. N., Blott, S. C., Wiener, P. & Woolliams, J. A., 1 Jan 2015, In: Frontiers in genetics. 5, FEB, 00097.

    Research output: Contribution to journalArticlepeer-review

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