Edinburgh Research Explorer

Dr Kenneth Baillie

Snr. Clinical Research Fellow in Anaesthesia & Critical Care

Kenneth Baillie

  • Deanery of Clinical Sciences
  • Centre for Inflammation Research
Postal address:
51 Little France Crescent
Centre for Inflammation Research
EH16 4SA
United Kingdom

Research output

Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study

Docherty, A., Harrison, E., Green, C. A., Hardwick, H. E., Pius, R., Norman, L., Holden, K. A., Read, J. M., Dondelinger, F., Carson, G., Merson, L., Lee, J., Plotkin, D., Sigfrid, E., Halpin, S., Jackson, C., Gamble, C., Horby, P. W., Nguyen-Van-Tam, J. S., Ho, A. & 5 others, Russell, C. D., Dunning, J., Openshaw, P. J. M., Baillie, K. & Semple, M. G., 22 May 2020, In : BMJ.

Combined Mesenchymal Stromal Cell Therapy and ECMO in ARDS: A Controlled Experimental Study in Sheep

Combining Extracorporeal Life Support and Cell Therapy in Critical Illness (CELTIC) investigators. & Millar, J., 15 Apr 2020, In : American Journal of Respiratory and Critical Care Medicine.

An evidence-based framework for priority clinical research questions for COVID-19

Harris, C., Carson, G., Baillie, K., Horby, P. & Nair, H., 31 Mar 2020, In : Journal of Global Health. 10, 1

Comprehensive characterisation of transcriptional activity during influenza A virus infection reveals biases in cap-snatching of host RNA sequences.

Clohisey, S., Parkinson, N., Wang, B., Bertin, N., Wise, H., Tomoiu, A., FANTOM consortium, T., Summers, K. M., Hendry, R. W., Carninci, P., Forrest, A. A., Hayashizaki, Y., Digard, P., Hume, D. & Baillie, K., 11 Mar 2020, In : Journal of Virology.

Clinical evidence does not support corticosteroid treatment for 2019-nCoV lung injury

Russell, C. D., Millar, J. E. & Baillie, J. K., 7 Feb 2020, In : The Lancet. 395, 10223, p. 473-475 3 p.

Genome-wide CRISPR screen Identifies Host Dependency Factors for Influenza A Virus Infection

Li, B., Clohisey, S. M., Chia, B. S., Wang, B., Cui, A., Eisenhaure, T., Schweitzer, L. D., Hoover, P., Parkinson, N. J., Nachshon, A., Smith, N., Regan, T., Farr, D., Gutmann, M. U., Bukhari, S. I., Law, A., Sangesland, M., Gat-viks, I., Digard, P., Vasudevan, S. & 5 others, Lingwood, D., Dockrell, D. H., Doench, J. G., Baillie, J. K. & Hacohen, N., 9 Jan 2020, In : Nature Communications. 11, 1

Hypoxia modulates platelet purinergic signalling pathways

Paterson, G. G., Young, J. M., Willson, J. A., Graham, C. J., Dru, R. C., Lee, E. W., Torpey, G. S., Walmsley, S., Chan, M. V., Warner, T. D., Baillie, K. & Roger Thompson, A. A., 13 Dec 2019, In : Thrombosis and Haemostasis.

The effect of dexmedetomidine and clonidine on the inflammatory response in critical illness: a systematic review of animal and human studies

Flanders, C. A., Rocke, A. S., Edwardson, S. A., Baillie, J. K. & Walsh, T. S., 11 Dec 2019, In : Critical Care. 23, 1, p. 402

Host Susceptibility to Severe Influenza A Virus Infection

Clohisey, S. & Baillie, J., 5 Sep 2019, In : Critical Care.

Predictive validity of a novel non-invasive estimation of effective shunt fraction in critically ill patients.

Chang, E. M., Bretherick, A., Drummond, G. B., Baillie, J. & Baillie, J., 20 Aug 2019, In : Intensive care medicine experimental .

The utility of peripheral blood leucocyte ratios as biomarkers in infectious diseases: a systematic review and meta-analysis

Russell, C. D., Parajuli, A., Gale, H. J., Bulteel, N. S., Schuetz, P., de Jager, C. P. C., Loonen, A. J. M., Merekoulias, G. I. & Baillie, J., 22 Feb 2019, In : Journal of Infection.

The Search for Efficacious New Therapies in Sepsis Needs to Embrace Heterogeneity

Scicluna, B. P. & Baillie, J. K., 12 Dec 2018, In : American Journal of Respiratory and Critical Care Medicine.

Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease

IIBDGC Consortium & FANTOM5 Consortium , 1 Mar 2018, In : PLoS Computational Biology. 14, 3, p. e1005934

The 2018 Lake Louise Acute Mountain Sickness Score

Roach, R. C., Hackett, P. H., Oelz, O., Bärtsch, P., Luks, A. M., MacInnis, M. J., Baillie, J. K. & Lake Louise AMS Score Consensus Committee, 1 Mar 2018, In : High Altitude Medicine and Biology. 19, 1, p. 4-6 3 p.

Thromboelastometry and Platelet Function during Acclimatization to High Altitude

Rocke, A. S., Paterson, G. G., Barber, M. T., Jackson, A. I. R., Main, S., Stannett, C., Schnopp, M. F., Baillie, J. K., Horne, E. H., Moores, C., Harrison, P., Nimmo, A. F. & Thompson, A. A. R., 5 Jan 2018, In : Thrombosis and Haemostasis. 118, 1, p. 63-71 9 p.

FANTOM5 CAGE profiles of human and mouse samples

Noguchi, S., Arakawa, T., Fukuda, S., Furuno, M., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Kaida, K., Kaiho, A., Kanamori-Katayama, M., Kawashima, T., Kojima, M., Kubosaki, A., Manabe, R-I., Murata, M., Nagao-Sato, S., Nakazato, K., Ninomiya, N., Nishiyori-Sueki, H., Noma, S. & 158 others, Saijyo, E., Saka, A., Sakai, M., Simon, C., Suzuki, N., Tagami, M., Watanabe, S., Yoshida, S., Arner, P., Axton, R. A., Babina, M., Baillie, J. K., Barnett, T. C., Beckhouse, A. G., Blumenthal, A., Bodega, B., Bonetti, A., Briggs, J., Brombacher, F., Carlisle, A. J., Clevers, H. C., Davis, C. A., Detmar, M., Dohi, T., Edge, A. S. B., Edinger, M., Ehrlund, A., Ekwall, K., Endoh, M., Enomoto, H., Eslami, A., Fagiolini, M., Fairbairn, L., Farach-Carson, M. C., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L. M., Fujita, R., Furusawa, J-I., Geijtenbeek, T. B., Gingeras, T., Goldowitz, D., Guhl, S., Guler, R., Gustincich, S., Ha, T. J., Hamaguchi, M., Hara, M., Hasegawa, Y., Herlyn, M., Heutink, P., Hitchens, K. J., Hume, D. A., Ikawa, T., Ishizu, Y., Kai, C., Kawamoto, H., Kawamura, Y. I., Kempfle, J. S., Kenna, T. J., Kere, J., Khachigian, L. M., Kitamura, T., Klein, S., Klinken, S. P., Knox, A. J., Kojima, S., Koseki, H., Koyasu, S., Lee, W., Lennartsson, A., Mackay-Sim, A., Mejhert, N., Mizuno, Y., Morikawa, H., Morimoto, M., Moro, K., Morris, K. J., Motohashi, H., Mummery, C. L., Nakachi, Y., Nakahara, F., Nakamura, T., Nakamura, Y., Nozaki, T., Ogishima, S., Ohkura, N., Ohno, H., Ohshima, M., Okada-Hatakeyama, M., Okazaki, Y., Orlando, V., Ovchinnikov, D. A., Passier, R., Patrikakis, M., Pombo, A., Pradhan-Bhatt, S., Qin, X-Y., Rehli, M., Rizzu, P., Roy, S., Sajantila, A., Sakaguchi, S., Sato, H., Satoh, H., Savvi, S., Saxena, A., Schmidl, C., Schneider, C., Schulze-Tanzil, G. G., Schwegmann, A., Sheng, G., Shin, J. W., Sugiyama, D., Sugiyama, T., Summers, K. M., Takahashi, N., Takai, J., Tanaka, H., Tatsukawa, H., Tomoiu, A., Toyoda, H., van de Wetering, M., van den Berg, L. M., Verardo, R., Vijayan, D., Wells, C. A., Winteringham, L. N., Wolvetang, E., Yamaguchi, Y., Yamamoto, M., Yanagi-Mizuochi, C., Yoneda, M., Yonekura, Y., Zhang, P. G., Zucchelli, S., Abugessaisa, I., Arner, E., Harshbarger, J., Kondo, A., Lassmann, T., Lizio, M., Sahin, S., Sengstag, T., Severin, J., Shimoji, H., Suzuki, M., Suzuki, H., Kawai, J., Kondo, N., Itoh, M., Daub, C. O., Kasukawa, T., Kawaji, H., Carninci, P., Forrest, A. R. R. & Hayashizaki, Y., 29 Aug 2017, In : Scientific Data. 4, 170112.

Treatable traits and therapeutic targets: goals for systems biology in infectious disease

Russell, C. & Baillie, J., 27 Apr 2017, In : Current Opinion in Systems Biology. 2, p. 140-146

Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease

Baillie, J., Arner, E., Daub, C., De Hoon, M., Itoh, M., Kawaji, H., Lassmann, T., Carninci, P., Forrest, A. R. R., Hayashizaki, Y., The FANTOM Consortium, Faulkner, G., Wells, C. A., Rehli, M., Pavli, P., Summers, K. & Hume, D., 6 Mar 2017, In : PLoS Genetics. 13, 3, e1006641.

Middle East Respiratory Syndrome

Arabi, Y. M., Balkhy, H. H., Hayden, F. G., Bouchama, A., Luke, T., Baillie, J., Al-Omari, A., Hajeer, A. H., Senga, M., Denison, M. R., Nguyen-Van-Tam, J. S., Shindo, N., Bermingham, A., Chappell, J. D., Van Kerkhove, M. D. & Fowler, R. A., 9 Feb 2017, In : New England Journal of Medicine. 376, p. 584-594 11 p.

FANTOM5 web resource for the large-scale genome-wide transcription start site activity profiles of wide-range of mammalian cells

Kasukawa, T., Lizio, M., Harshbarger, J., Hisashi, S., Severin, J., Imad, A., Sahin, S., Freeman, T. C., Baillie, K., Sandelin, A., Carninci, P., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 26 May 2016, In : Human genomics. 10, Suppt. 1, p. 34 2 p., P42.

Microglial brain region−dependent diversity and selective regional sensitivities to aging

Renault, K., Michoel, T., Karavolos, M., Clohisey, S., Baillie, J., Stevens, M., Freeman, T., Summers, K. & McColl, B., Mar 2016, In : Nature Neuroscience. 19, 3, p. 504-516

The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

Hurst, L. D., Ghanbarian, A. T., Forrest, A. R. R., FANTOM consortium & Huminiecki, L., 18 Dec 2015, In : PLoS Biology. 13, 12, e1002315.

The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis

Patarčić, I., Gelemanović, A., Kirin, M., Kolčić, I., Theodoratou, E., Baillie, K. J., de Jong, M. D., Rudan, I., Campbell, H. & Polašek, O., 3 Nov 2015, In : Scientific Reports. 5, p. 16119

Gene regulation. Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

Arner, E., Daub, C. O., Vitting-Seerup, K., Andersson, R., Lilje, B., Drabløs, F., Lennartsson, A., Rönnerblad, M., Hrydziuszko, O., Vitezic, M., Freeman, T. C., Alhendi, A. M. N., Arner, P., Axton, R., Baillie, J. K., Beckhouse, A., Bodega, B., Briggs, J., Brombacher, F., Davis, M. & 31 others, Detmar, M., Ehrlund, A., Endoh, M., Eslami, A., Fagiolini, M., Fairbairn, L., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L., Goldowitz, D., Guler, R., Ha, T., Hara, M., Herlyn, M., Ikawa, T., Kai, C., Kawamoto, H., Khachigian, L. M., Klinken, S. P., Kojima, S., Koseki, H., Klein, S., Mejhert, N., Miyaguchi, K., Mizuno, Y., Morimoto, M., Tomoiu, A., Summers, K. M., Hume, D. A. & FANTOM Consortium, 27 Feb 2015, In : Science. 347, 6225, p. 1010-4 5 p.

Gateways to the FANTOM5 promoter level mammalian expression atlas

Lizio, M., Harshbarger, J., Shimoji, H., Severin, J., Kasukawa, T., Sahin, S., Abugessaisa, I., Fukuda, S., Hori, F., Ishikawa-Kato, S., Mungall, C. J., Arner, E., Baillie, J. K., Bertin, N., Bono, H., de Hoon, M., Diehl, A. D., Dimont, E., Freeman, T. C., Fujieda, K. & 22 others, Hide, W., Kaliyaperumal, R., Katayama, T., Lassmann, T., Meehan, T. F., Nishikata, K., Ono, H., Rehli, M., Sandelin, A., Schultes, E. A., Hoen, P. A. C., Tatum, Z., Thompson, M., Toyoda, T., Wright, D. W., Daub, C. O., Itoh, M., Carninci, P., Hayashizaki, Y., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 5 Jan 2015, In : Genome Biology. 16, 14 p., 22.

The Effectiveness of Convalescent Plasma and Hyperimmune Immunoglobulin for the Treatment of Severe Acute Respiratory Infections of Viral Etiology: A Systematic Review and Exploratory Meta-analysis

Mair-Jenkins, J., Saavedra-Campos, M., Baillie, J. K., Cleary, P., Khaw, F-M., Lim, W. S., Makki, S., Rooney, K. D., Beck, C. R. & Convalescent Plasma Study Group, 1 Jan 2015, In : The Journal of Infectious Diseases. 211, 1, p. 80-90 11 p.

Antiviral combinations for severe influenza

Dunning, J., Baillie, J. K., Cao, B., Hayden, F. G. & International Severe Acute Respiratory and Emerging Infection Consortium (ISARIC), Dec 2014, In : The Lancet Infectious Diseases. 14, 12, p. 1259-70 12 p.

Stratified infection medicine: a call to arms

Russell, C., Griffiths, S. J., Baillie, J. K. & Haas, J., Jun 2014, In : The Lancet Infectious Diseases. 14, 6, p. 451-451 1 p.

Translational genomics. Targeting the host immune response to fight infection

Baillie, J. K., 23 May 2014, In : Science. 344, 6186, p. 807-808 2 p.

Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions

Davis, M. R., Andersson, R., Severin, J., De Hoon, M., Bertin, N., Baillie, J. K., Kawaji, H., Sandelin, A., Forrest, A. R. R., Summers, K. M. & Fantom Consortium, 1 May 2014, In : Molecular Genetics and Metabolism. 112, 1, p. 73-83

A promoter-level mammalian expression atlas

Forrest, A. R. R., Kawaji, H., Rehli, M., Baillie, J. K., de Hoon, M. J. L., Haberle, V., Lassmann, T., Kulakovskiy, I. V., Lizio, M., Itoh, M., Andersson, R., Mungall, C. J., Meehan, T. F., Schmeier, S., Bertin, N., Jorgensen, M., Dimont, E., Arner, E., Schmidl, C., Schaefer, U. & 32 others, Medvedeva, Y. A., Plessy, C., Vitezic, M., Severin, J., Semple, C. A., Ishizu, Y., Young, R. S., Francescatto, M., Alam, I., Albanese, D., Altschuler, G. M., Arakawa, T., Archer, J. A. C., Arner, P., Babina, M., Rennie, S., Balwierz, P. J., Beckhouse, A. G., Pradhan-Bhatt, S., Blake, J. A., Blumenthal, A., Fisher, M. E., Ha, T. J., Joshi, A., Meynert, A., Prendergast, J. G. D., Summers, K. M., Freeman, T. C., Taylor, M. S., Hume, D. A., FANTOM Consortium & RIKEN PMI CLST DGT, 27 Mar 2014, In : Nature. 507, 7493, p. 462-+ 22 p.

An atlas of active enhancers across human cell types and tissues

Andersson, R., Gebhard, C., Miguel-Escalada, I., Hoof, I., Bornholdt, J., Boyd, M., Chen, Y., Zhao, X., Schmidl, C., Suzuki, T., Ntini, E., Arner, E., Valen, E., Li, K., Schwarzfischer, L., Glatz, D., Raithel, J., Lilje, B., Rapin, N., Bagger, F. O. & 31 others, Jørgensen, M., Andersen, P. R., Bertin, N., Rackham, O., Burroughs, A. M., Baillie, J. K., Ishizu, Y., Shimizu, Y., Furuhata, E., Maeda, S., Negishi, Y., Mungall, C. J., Meehan, T. F., Lassmann, T., Itoh, M., Kawaji, H., Kondo, N., Kawai, J., Lennartsson, A., Daub, C. O., Heutink, P., Hume, D. A., Jensen, T. H., Suzuki, H., Hayashizaki, Y., FANTOM Consortium, Young, R. S., Fisher, M. E., Meynert, A., Prendergast, J. G. D. & Taylor, M. S., 27 Mar 2014, In : Nature. 507, 7493, p. 455-61 7 p.

Network analysis reveals distinct clinical syndromes underlying acute mountain sickness

Hall, D. P., MacCormick, I. J. C., Phythian-Adams, A. T., Rzechorzek, N. M., Hope-Jones, D., Cosens, S., Jackson, S., Bates, M. G. D., Collier, D. J., Hume, D. A., Freeman, T., Thompson, A. A. R. & Baillie, J. K., 22 Jan 2014, In : PLoS ONE. 9, 1, p. e81229

Open source clinical science for emerging infections

Dunning, J. W., Merson, L., Rohde, G. G. U., Gao, Z., Semple, M. G., Tran, D., Gordon, A., Olliaro, P. L., Khoo, S. H., Bruzzone, R., Horby, P., Cobb, J. P., Longuere, K-S., Kellam, P., Nichol, A., Brett, S., Everett, D., Walsh, T. S., Hien, T-T., Yu, H. & 15 others, Zambon, M., Ruiz-Palacios, G., Lang, T., Akhvlediani, T., Hayden, F. G., Marshall, J., Webb, S., Angus, D. C., Shindo, N., van der Werf, S., Openshaw, P. J. M., Farrar, J., Carson, G., Baillie, J. K. & ISARIC Working Group 3, ISARIC Council, Jan 2014, In : The Lancet Infectious Diseases. 14, 1, p. 8-9 2 p.

Heteroresistance at the single-cell level: adapting to antibiotic stress through a population-based strategy and growth-controlled interphenotypic coordination

Wang, X., Kang, Y., Luo, C., Zhao, T., Liu, L., Jiang, X., Fu, R., An, S., Chen, J., Jiang, N., Ren, L., Wang, Q., Baillie, J. K., Gao, Z. & Yu, J., 2014, In : mBio. 5, 1, p. e00942-13

Deciding authorship order

Brennan, P. M., Jubb, A., Baillie, J. K. & Partridge, R. W., 16 Dec 2013, In : BMJ. 347, 3 p., 7182.

An expression atlas of human primary cells: inference of gene function from coexpression networks

Mabbott, N. A., Baillie, J. K., Brown, H., Freeman, T. C. & Hume, D. A., 20 Sep 2013, In : BMC Genomics. 14, 1, 13 p., 632.

Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla -selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses

Simmonds, P., Xia, W., Baillie, J. K. & McKinnon, K., 10 Sep 2013, In : BMC Genomics. 14, 1, 16 p., 610.

An updated systematic review of the role of host genetics in susceptibility to influenza

Horby, P., Nguyen, N. Y., Dunstan, S. J. & Baillie, J. K., Sep 2013, In : Influenza and other respiratory viruses. 7 Suppl 2, p. 37-41 5 p.

Influenza - Time to Target the Host?

Baillie, J. K. & Digard, P., 11 Jul 2013, In : New England Journal of Medicine. 369, 2, p. 191-193 3 p.

Wide variation and systematic bias in expert clinicians' perceptions of prognosis following brain injury

Moore, N. A., Brennan, P. M. & Baillie, J. K., Jun 2013, In : British Journal of Neurosurgery . 27, 3, p. 340-343 4 p.

Endogenous Retrotransposition Activates Oncogenic Pathways in Hepatocellular Carcinoma

Shukla, R., Upton, K. R., Munoz-Lopez, M., Gerhardt, D. J., Fisher, M. E., Thu Nguyen, N. V., Brennan, P. M., Baillie, J. K., Collino, A., Ghisletti, S., Sinha, S., Iannelli, F., Radaelli, E., Dos Santos, A., Rapoud, D., Guettier, C., Samuel, D., Natoli, G., Carninci, P., Ciccarelli, F. D. & 3 others, Garcia-Perez, J., Faivre, J. & Faulkner, G. J., 28 Mar 2013, In : Cell. 153, 1, p. 101-111 11 p.

Complete genome sequence of methicillin-sensitive Staphylococcus aureus containing a heterogeneic staphylococcal cassette chromosome element

Li, D., Chu, Y., Ren, L., Li, X., Yuan, L., Kang, Y., Zhang, W., Yang, Y., Wang, X., Baillie, J. K., Yu, J. & Gao, Z., Mar 2013, In : Science China Life Sciences. 56, 3, p. 268-274 7 p.

Retinal vessel tortuosity in response to hypobaric hypoxia

MacCormick, I. J. C., Somner, J., Morris, D. S., MacGillivray, T. J., Bourne, R. R. A., Huang, S. S., MacCormick, A., Aspinall, P. A., Baillie, J. K., Thompson, A. A. R. & Dhillon, B., Dec 2012, In : High Altitude Medicine and Biology. 13, 4, p. 263-268 6 p.

A gene expression atlas of the domestic pig

Freeman, T. C., Ivens, A., Baillie, J. K., Beraldi, D., Barnett, M. W., Dorward, D., Downing, A., Fairbairn, L., Kapetanovic, R., Raza, S., Tomoiu, A., Alberio, R., Wu, C., Su, A. I., Summers, K. M., Tuggle, C. K., Archibald, A. L. & Hume, D. A., 15 Nov 2012, In : BMC Biology. 10, n/a, 21 p., 90.

IFITM3 restricts the morbidity and mortality associated with influenza

GenISIS Investigators, The MOSAIC Investigators & Haley, C., 26 Apr 2012, In : Nature. 484, 7395, p. 519-23 5 p.

Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

Schroder, K., Irvine, K. M., Taylor, M. S., Bokil, N. J., Le Cao, K-A., Masterman, K-A., Labzin, L. I., Semple, C. A., Kapetanovic, R., Fairbairn, L., Akalin, A., Faulkner, G. J., Baillie, J. K., Gongora, M., Daub, C. O., Kawaji, H., McLachlan, G. J., Goldman, N., Grimmond, S. M., Carninci, P. & 5 others, Suzuki, H., Hayashizaki, Y., Lenhard, B., Hume, D. A. & Sweet, M. J., 17 Apr 2012, In : Proceedings of the National Academy of Sciences. 109, 16, p. E944-E953

The Role of Host Genetics in Susceptibility to Influenza: A Systematic Review

Horby, P., Nguyen, N. Y., Dunstan, S. J. & Baillie, J. K., 15 Mar 2012, In : PLoS ONE. 7, 3, p. - 9 p., e33180.

High altitude adaptation in Daghestani populations from the Caucasus

Pagani, L., Ayub, Q., MacArthur, D. G., Xue, Y., Baillie, J. K., Chen, Y., Kozarewa, I., Turner, D. J., Tofanelli, S., Bulayeva, K., Kidd, K., Paoli, G. & Tyler-Smith, C., Mar 2012, In : Human Genetics. 131, 3, p. 423-33 11 p.

IFITM3 restricts the morbidity and mortality associated with influenza

Everitt, A., Clare, S., Pertel, T., John, S., Wash, R., Smith, S., Chin, C., Feeley, E., Simms, J., Adams, D., Wise, H., Kane, L., Goulding, D., Digard, P., Anttila, V., Baillie, K., Walsh, T., Hume, D., Palotie, A., Xue, Y. & 9 others, Colonna, V., Tyler-Smith, C., Dunning, J., Gordon, S., Smyth, R. S., Openshaw, P., Dougan, G., Brass, A. & Kellam, P., 2012, In : International Journal of Infectious Diseases. 16, Suppt 1, p. E79-E79

Identification of Novel Genes Selectively Expressed in the Follicle-Associated Epithelium from the Meta-Analysis of Transcriptomics Data from Multiple Mouse Cell and Tissue Populations

Kobayashi, A., Donaldson, D. S., Kanaya, T., Fukuda, S., Baillie, J. K., Freeman, T. C., Ohno, H., Williams, I. R. & Mabbott, N. A., 2012, In : DNA Research. 19, 5, p. 407-422 16 p.

Somatic retrotransposition alters the genetic landscape of the human brain

Baillie, J. K., Barnett, M. W., Upton, K. R., Gerhardt, D. J., Richmond, T. A., De Sapio, F., Brennan, P., Rizzu, P., Smith, S., Fell, M., Talbot, R. T., Gustincich, S., Freeman, T. C., Mattick, J. S., Hume, D. A., Heutink, P., Carninci, P., Jeddeloh, J. A. & Faulkner, G. J., Nov 2011, In : Nature. 479, 7374, p. 534-537 4 p.

Sildenafil citrate for the prevention of high altitude hypoxic pulmonary hypertension: double blind, randomized, placebo-controlled trial

Bates, M. G. D., Thompson, A. A. R., Baillie, J. K., Sutherland, A. I., Irving, J. B., Hirani, N. & Webb, D. J., 2011, In : High Altitude Medicine and Biology. 12, 3, p. 207-14 8 p.

Passage of pathogenic microorganisms through breathing system filters used in anaesthesia and intensive care

Scott, D. H. T., Fraser, S., Willson, P., Drummond, G. B. & Baillie, J. K., Jul 2010, In : Anaesthesia. 65, 7, p. 670-673 4 p.

Functional clustering and lineage markers: Insights into cellular differentiation and gene function from large-scale microarray studies of purified primary cell populations

Hume, D. A., Summers, K. M., Raza, S., Baillie, K. & Freeman, T. C., Jun 2010, In : Genomics. 95, 6, p. 328-338 11 p.

Incidence and predictors of acute mountain sickness among trekkers on Mount Kilimanjaro

Jackson, S. J., Varley, J., Sellers, C., Josephs, K., Codrington, L., Duke, G., Njelekela, M. A., Drummond, G., Sutherland, A. I., Thompson, A. A. R. & Baillie, J. K., 2010, In : High Altitude Medicine and Biology. 11, 3, p. 217-222 6 p.

Meta-analysis of lineage-specific gene expression signatures in mouse leukocyte populations

Mabbott, N. A., Kenneth Baillie, J., Hume, D. A. & Freeman, T. C., 2010, In : Immunobiology. 215, 9-10, p. 724-36 13 p.

The citric acid cough threshold and the ventilatory response to carbon dioxide on ascent to high altitude

Thompson, A. A. R., Baillie, J. K., Bates, M. G. D., Schnopp, M. F., Simpson, A., Partridge, R. W., Drummond, G. B. & Mason, N. P., Aug 2009, In : Respiratory Medicine. 103, 8, p. 1182-1188 7 p.

Oral antioxidant supplementation does not prevent acute mountain sickness: double blind, randomized placebo-controlled trial

Baillie, J. K., Thompson, A. A. R., Irving, J. B., Bates, M. G. D., Sutherland, A. I., MacNee, W., Maxwell, S. R. J. & Webb, D. J., May 2009, In : QJM: An International Journal of Medicine. 102, 5, p. 341-348 8 p.

Change in plasma vascular endothelial growth factor during onset and recovery from acute mountain sickness

Dorward, D., Roger Thompson, A. A., Kenneth Baillie, J., MacDougall, M. & Hirani, N., 1 Mar 2007, In : Respiratory Medicine. 101, 3, p. 587-594

Pericardial effusions in healthy lowlanders after acute ascent to high altitude

Thompson, A. A. R., Baillie, J. K., Toshner, M., Maxwell, S. R. J., Webb, D. J. & Irving, J. B., Apr 2006, In : Heart. 92, 4, p. 539-40 2 p.


A clinical trial of convalescent plasma for treatment of Ebolavirus disease

Baillie, K.



COVID19 Rapid Response - Protocol for Severe Emerging Infection

Baillie, K.



Cell library for candidate genes involved in Newcastle Disease Virus infection in vitro

Digard, P., Baillie, K., Dalziel, R. & Grey, F.

UK industry, commerce and public corporations


GenISIS: genetics of influenza susceptibility in scotland

Baillie, K., Freeman, T., Haley, C. & Hume, D.

UK central government bodies/local authorities, health and hospital authorities


Generation of a Cas9 Transgenic Chicken as a Platform to Identify Causative Production Alleles for Application in Breeding Programmmes

Wilson, A., Baillie, K. & Balic, A.



Host factors controlling foot-and-mouth disease virus (FMDV) replication: towards genetic control of FMD in pigs

Haas, J., Baillie, K. & Grey, F.



IPS18 Pump-priming: Establishing genome-scale CRISPR screens for disease resistance in Atlantic salmon

Houston, R., Baillie, K., Clohisey, S., Gratacap, R., Grey, F., Macqueen, D., Regan, T. & Robledo, D.



ISP18 Pump-priming: A leadership strategy for livestock pathogen GeCKO screens

Digard, P., Baillie, K., Connelley, T., Dalziel, R., Gaunt, E., Grey, F., Hassan, M., Tait-Burkard, C., Vervelde, L. & Whitelaw, B.



ISP19 Pump-priming: Evaluation of adeno-associated viral vector delivery in porcine lungs

Baillie, K., Choudhary, T., Clohisey, S., Collie, D., Grey, F., Lillico, S., McLachlan, G. & Whitelaw, B.



ISSF3 funding: Generation of a constitutive Cas9 pig for gene-level pharmaceutical target validation.

Baillie, K., Clohisey, S. & Lillico, S.


Identification and characterisation of host factors underlying susceptibility to influenza

Baillie, K.

UK-based charities


Identification and characterisation of host factors underlying susceptibility to influenza

Baillie, K.


Identification of interferon stimulated genes that restrict cross-species transmission of influenza A virus.

Grey, F., Baillie, K., Digard, P. & Smith, J.



Large memory HPC infrastructure to underpin world-class biological research

Law, A., Baillie, K., Hickey, J., Houston, R., Prendergast, J., Smith, J., Watson, M. & Wilson, A.



Mechanisms of severe acute influenza consortium

Baillie, K. & Hume, D.



Optimising Innate Host Defence to Combat Antimicrobial Resistance

Dockrell, D., Baillie, K., Bradley, M., Brown, H., Dhaliwal, K., Fitzgerald, R., Haslett, C., Hume, D., Rossi, A., Walmsley, S. & Whyte, M.



Prevention of Disease, Disability, and Death through Immunization and Control of Respiratory and Related Diseases

Baillie, K.



nCoV: COVID-19: ISARIC - Coronavirus Clinical Characterisation Consortium (ISARIC-4C)

Baillie, K. & Law, A.



Press clippings

Dr Ken Baillie finds altitude sickness could help inform treatments for patients in intensive care

Kenneth Baillie


5 items of Media coverage

Dr Ken Baillie finds altitude sickness is two separate illnesses.

Kenneth Baillie


8 items of Media coverage

Dr Ken Baillie on the medical conundrum of plane stowaways

Kenneth Baillie


1 Media contribution

Dr Kenneth Baillie helps identify gene linked to flu

Kenneth Baillie


31 items of Media coverage

Research on brain cells

Kenneth Baillie


1 item of Media coverage

Sepsis hope as study examines how DNA affects infection risk

John Baillie


1 Media contribution