Edinburgh Research Explorer

Dr Kenneth Baillie

Snr. Clinical Research Fellow in Anaesthesia & Critical Care

  1. 2020
  2. Risk stratification of patients admitted to hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: development and validation of the 4C Mortality Score

    Knight, S. R., Ho, A., Pius, R., Buchan, I., Carson, G., Drake, T. M., Dunning, J., Fairfield, C. J., Gamble, C., Green, C. A., Gupta, R., Halpin, S., Hardwick, H. E., Holden, K. A., Horby, P. W., Jackson, C., Mclean, K. A., Merson, L., Nguyen-van-tam, J. S., Norman, L. & 15 others, Noursadeghi, M., Olliaro, P. L., Pritchard, M. G., Russell, C. D., Shaw, C. A., Sheikh, A., Solomon, T., Sudlow, C., Swann, O. V., Turtle, L. C., Openshaw, P. J., Baillie, J. K., Semple, M. G., Docherty, A. B. & Harrison, E. M., 9 Sep 2020, In : BMJ. p. m3339

    Research output: Contribution to journalArticle

  3. Clinical characteristics of children and young people admitted to hospital with covid-19 in United Kingdom: prospective multicentre observational cohort study

    Swann, O. V., Holden, K. A., Turtle, L., Pollock, L., Fairfield, C. J., Drake, T. M., Seth, S., Egan, C., Hardwick, H. E., Halpin, S., Girvan, M., Donohue, C., Pritchard, M., Patel, L. B., Ladhani, S., Sigfrid, L., Sinha, I. P., Olliaro, P. L., Nguyen-van-tam, J. S., Horby, P. W. & 8 others, Merson, L., Carson, G., Dunning, J., Openshaw, P. J. M., Baillie, J. K., Harrison, E. M., Docherty, A. B. & Semple, M. G., 27 Aug 2020, In : BMJ. p. m3249

    Research output: Contribution to journalArticle

  4. RECOVERY- Respiratory Support: Respiratory Strategies for patients with suspected or proven COVID-19 respiratory failure; Continuous Positive Airway Pressure, High-flow Nasal Oxygen, and standard care: A structured summary of a study protocol for a randomised controlled trial

    Perkins, G. D., Couper, K., Connolly, B., Baillie, J. K., Bradley, J. M., Dark, P., De Soyza, A., Gorman, E., Gray, A., Hamilton, L., Hart, N., Ji, C., Lall, R., McGowan, N., Regan, S., Simonds, A. K., Skilton, E., Stallard, N., Stimpson, E., Yeung, J. & 1 others, McAuley, D. F., 29 Jul 2020, In : Trials. 21, 1, p. 687

    Research output: Contribution to journalArticle

  5. Functional annotation of human long noncoding RNAs via molecular phenotyping

    Ramilowski, J. A., Yip, C. W., Agrawal, S., Chang, J-C., Ciani, Y., Kulakovskiy, I. V., Mendez, M., Ooi, J. L. C., Ouyang, J. F., Parkinson, N., Petri, A., Roos, L., Severin, J., Yasuzawa, K., Abugessaisa, I., Akalin, A., Antonov, I. V., Arner, E., Bonetti, A., Bono, H. & 96 others, Borsari, B., Brombacher, F., Cameron, C. J. F., Cannistraci, C. V., Cardenas, R., Cardon, M., Chang, H., Dostie, J., Ducoli, L., Favorov, A., Fort, A., Garrido, D., Gil, N., Gimenez, J., Guler, R., Handoko, L., Harshbarger, J., Hasegawa, A., Hasegawa, Y., Hashimoto, K., Hayatsu, N., Heutink, P., Hirose, T., Imada, E. L., Itoh, M., Kaczkowski, B., Kanhere, A., Kawabata, E., Kawaji, H., Kawashima, T., Kelly, S. T., Kojima, M., Kondo, N., Koseki, H., Kouno, T., Kratz, A., Kurowska-Stolarska, M., Kwon, A. T. J., Leek, J., Lennartsson, A., Lizio, M., López-Redondo, F., Luginbühl, J., Maeda, S., Makeev, V. J., Marchionni, L., Medvedeva, Y. A., Minoda, A., Müller, F., Muñoz-Aguirre, M., Murata, M., Nishiyori, H., Nitta, K. R., Noguchi, S., Noro, Y., Nurtdinov, R., Okazaki, Y., Orlando, V., Paquette, D., Parr, C. J. C., Rackham, O. J. L., Rizzu, P., Sánchez Martinez, D. F., Sandelin, A., Sanjana, P., Semple, C. A. M., Shibayama, Y., Sivaraman, D. M., Suzuki, T., Szumowski, S. C., Tagami, M., Taylor, M. S., Terao, C., Thodberg, M., Thongjuea, S., Tripathi, V., Ulitsky, I., Verardo, R., Vorontsov, I. E., Yamamoto, C., Young, R. S., Baillie, J. K., Forrest, A. R. R., Guigó, R., Hoffman, M. M., Hon, C. C., Kasukawa, T., Kauppinen, S., Kere, J., Lenhard, B., Schneider, C., Suzuki, H., Yagi, K., de Hoon, M. J. L., Shin, J. W. & Carninci, P., 27 Jul 2020, In : Genome Research.

    Research output: Contribution to journalArticle

  6. Dexamethasone in Hospitalized Patients with Covid-19 - Preliminary Report

    RECOVERY Collaborative Group, 17 Jul 2020, In : New England Journal of Medicine.

    Research output: Contribution to journalArticle

  7. Correction to: Predictive validity of a novel non-invasive estimation of effective shunt fraction in critically ill patients

    Chang, E. M., Bretherick, A., Drummond, G. B. & Baillie, J. K., 10 Jul 2020, In : Intensive care medicine experimental . 8, 1, p. 30

    Research output: Contribution to journalArticle

  8. Using imaging to combat a pandemic: rationale for developing the UK National COVID-19 Chest Imaging Database

    Jacob, J., Alexander, D., Baillie, J. K., Berka, R., Bertolli, O., Blackwood, J., Buchan, I., Bloomfield, C., Cushnan, D., Docherty, A., Edey, A., Favaro, A., Gleeson, F., Halling-Brown, M., Hare, S., Jefferson, E., Johnstone, A., Kirby, M., Mcstay, R., Nair, A. & 11 others, Openshaw, P. J. M., Parker, G., Reilly, G., Robinson, G., Roditi, G., Rodrigues, J. C. L., Sebire, N., Semple, M. G., Sudlow, C., Woznitza, N. & Joshi, I., 2 Jul 2020, In : European Respiratory Journal.

    Research output: Contribution to journalArticle

  9. Hybrid Gene Origination Creates Human-Virus Chimeric Protein During Infection

    Yuin Ho, J. S., Angel, M., Ma, Y., Sloan, E., Wang, G., Martinez-Romero, C., Alenquer, M., Roudko, V., Chung, L., Zheng, S., Chang, M., Fstkchyan, Y., Clohisey, S., Dinan, A. M., Gibbs, J., Gifford, R., Shen, R., Gu, Q., Irigoyen, N., Campisi, L. & 34 others, Huang, C., Zhao, N., Jones, J., van Knippenberg, I., Zhu, Z., Moshkina, N., Meyer, L., Noel, J., Peralta, Z., Rezelji, V., Kaake, R., Rosenberg, B., Wang, B., Wei, J., Paessler, S., Wise, H., Johnson, J., Vannini, A., Amorim, M. J., Baillie, K., Miraldi, E. R., Benner, C., Brierley, I., Digard, P., Luksza, M., Firth, A. E., Krogan, N. J., Greenbaum, B. D., MacLeod, M. K., van Bakel, H., García-Sastre, A., Yewdell, J. W., Hutchinson, E. & Marrazi, I., 18 Jun 2020, In : Cell.

    Research output: Contribution to journalArticle

  10. Developing Novel Host-Based Therapies Targeting Microbicidal Responses in Macrophages and Neutrophils to Combat Bacterial Antimicrobial Resistance

    Watson, K., Russell, C. D., Baillie, J. K., Dhaliwal, K., Fitzgerald, J. R., Mitchell, T. J., Simpson, A. J., Renshaw, S. A. & Dockrell, D. H., 5 Jun 2020, In : Frontiers in Immunology. 11, p. 786

    Research output: Contribution to journalReview article

  11. Molecular patterns in acute pancreatitis reflect generalisable endotypes of the host response to systemic injury in humans

    Neyton, L. P. A., Zheng, X., Skouras, C., Doeschl-Wilson, A., Gutmann, M., Uings, I. J., Rao, F. V., Nicolas, A., Marshall, C., Wilson, L-M., Baillie, K. & Mole, D., 2 Jun 2020, In : Annals of Surgery.

    Research output: Contribution to journalArticle

  12. Cancer datasets and the SARS-CoV-2 pandemic: establishing principles for collaboration

    Palmieri, C., Palmer, D., Openshaw, P. J., Semple, M. G., Turtle, L. & Baillie, K., 25 May 2020, In : ESMO Open. 5, 3

    Research output: Contribution to journalLetter

  13. Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study

    Docherty, A., Harrison, E., Green, C. A., Hardwick, H. E., Pius, R., Norman, L., Holden, K. A., Read, J. M., Dondelinger, F., Carson, G., Merson, L., Lee, J., Plotkin, D., Sigfrid, E., Halpin, S., Jackson, C., Gamble, C., Horby, P. W., Nguyen-Van-Tam, J. S., Ho, A. & 5 others, Russell, C. D., Dunning, J., Openshaw, P. J. M., Baillie, K. & Semple, M. G., 22 May 2020, In : BMJ.

    Research output: Contribution to journalReview article

  14. Combined Mesenchymal Stromal Cell Therapy and ECMO in ARDS: A Controlled Experimental Study in Sheep

    Combining Extracorporeal Life Support and Cell Therapy in Critical Illness (CELTIC) investigators. & Millar, J., 15 Apr 2020, In : American Journal of Respiratory and Critical Care Medicine.

    Research output: Contribution to journalArticle

  15. An evidence-based framework for priority clinical research questions for COVID-19

    Harris, C., Carson, G., Baillie, K., Horby, P. & Nair, H., 31 Mar 2020, In : Journal of Global Health. 10, 1

    Research output: Contribution to journalArticle

  16. Comprehensive characterisation of transcriptional activity during influenza A virus infection reveals biases in cap-snatching of host RNA sequences.

    Clohisey, S., Parkinson, N., Wang, B., Bertin, N., Wise, H., Tomoiu, A., FANTOM consortium, T., Summers, K. M., Hendry, R. W., Carninci, P., Forrest, A. A., Hayashizaki, Y., Digard, P., Hume, D. & Baillie, K., 11 Mar 2020, In : Journal of Virology.

    Research output: Contribution to journalArticle

  17. Clinical evidence does not support corticosteroid treatment for 2019-nCoV lung injury

    Russell, C. D., Millar, J. E. & Baillie, J. K., 7 Feb 2020, In : The Lancet. 395, 10223, p. 473-475 3 p.

    Research output: Contribution to journalComment/debate

  18. Genome-wide CRISPR screen Identifies Host Dependency Factors for Influenza A Virus Infection

    Li, B., Clohisey, S. M., Chia, B. S., Wang, B., Cui, A., Eisenhaure, T., Schweitzer, L. D., Hoover, P., Parkinson, N. J., Nachshon, A., Smith, N., Regan, T., Farr, D., Gutmann, M. U., Bukhari, S. I., Law, A., Sangesland, M., Gat-viks, I., Digard, P., Vasudevan, S. & 5 others, Lingwood, D., Dockrell, D. H., Doench, J. G., Baillie, J. K. & Hacohen, N., 9 Jan 2020, In : Nature Communications. 11, 1

    Research output: Contribution to journalArticle

  19. 2019
  20. Hypoxia modulates platelet purinergic signalling pathways

    Paterson, G. G., Young, J. M., Willson, J. A., Graham, C. J., Dru, R. C., Lee, E. W., Torpey, G. S., Walmsley, S., Chan, M. V., Warner, T. D., Baillie, K. & Roger Thompson, A. A., 13 Dec 2019, In : Thrombosis and Haemostasis.

    Research output: Contribution to journalArticle

  21. The effect of dexmedetomidine and clonidine on the inflammatory response in critical illness: a systematic review of animal and human studies

    Flanders, C. A., Rocke, A. S., Edwardson, S. A., Baillie, J. K. & Walsh, T. S., 11 Dec 2019, In : Critical Care. 23, 1, p. 402

    Research output: Contribution to journalArticle

  22. Host Susceptibility to Severe Influenza A Virus Infection

    Clohisey, S. & Baillie, J., 5 Sep 2019, In : Critical Care.

    Research output: Contribution to journalArticle

  23. Predictive validity of a novel non-invasive estimation of effective shunt fraction in critically ill patients.

    Chang, E. M., Bretherick, A., Drummond, G. B., Baillie, J. & Baillie, J., 20 Aug 2019, In : Intensive care medicine experimental .

    Research output: Contribution to journalArticle

  24. The utility of peripheral blood leucocyte ratios as biomarkers in infectious diseases: a systematic review and meta-analysis

    Russell, C. D., Parajuli, A., Gale, H. J., Bulteel, N. S., Schuetz, P., de Jager, C. P. C., Loonen, A. J. M., Merekoulias, G. I. & Baillie, J., 22 Feb 2019, In : Journal of Infection.

    Research output: Contribution to journalArticle

  25. 2018
  26. The Search for Efficacious New Therapies in Sepsis Needs to Embrace Heterogeneity

    Scicluna, B. P. & Baillie, J. K., 12 Dec 2018, In : American Journal of Respiratory and Critical Care Medicine.

    Research output: Contribution to journalArticle

  27. Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease

    IIBDGC Consortium & FANTOM5 Consortium , 1 Mar 2018, In : PLoS Computational Biology. 14, 3, p. e1005934

    Research output: Contribution to journalArticle

  28. The 2018 Lake Louise Acute Mountain Sickness Score

    Roach, R. C., Hackett, P. H., Oelz, O., Bärtsch, P., Luks, A. M., MacInnis, M. J., Baillie, J. K. & Lake Louise AMS Score Consensus Committee, 1 Mar 2018, In : High Altitude Medicine and Biology. 19, 1, p. 4-6 3 p.

    Research output: Contribution to journalArticle

  29. Thromboelastometry and Platelet Function during Acclimatization to High Altitude

    Rocke, A. S., Paterson, G. G., Barber, M. T., Jackson, A. I. R., Main, S., Stannett, C., Schnopp, M. F., Baillie, J. K., Horne, E. H., Moores, C., Harrison, P., Nimmo, A. F. & Thompson, A. A. R., 5 Jan 2018, In : Thrombosis and Haemostasis. 118, 1, p. 63-71 9 p.

    Research output: Contribution to journalArticle

  30. 2017
  31. FANTOM5 CAGE profiles of human and mouse samples

    Noguchi, S., Arakawa, T., Fukuda, S., Furuno, M., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Kaida, K., Kaiho, A., Kanamori-Katayama, M., Kawashima, T., Kojima, M., Kubosaki, A., Manabe, R-I., Murata, M., Nagao-Sato, S., Nakazato, K., Ninomiya, N., Nishiyori-Sueki, H., Noma, S. & 158 others, Saijyo, E., Saka, A., Sakai, M., Simon, C., Suzuki, N., Tagami, M., Watanabe, S., Yoshida, S., Arner, P., Axton, R. A., Babina, M., Baillie, J. K., Barnett, T. C., Beckhouse, A. G., Blumenthal, A., Bodega, B., Bonetti, A., Briggs, J., Brombacher, F., Carlisle, A. J., Clevers, H. C., Davis, C. A., Detmar, M., Dohi, T., Edge, A. S. B., Edinger, M., Ehrlund, A., Ekwall, K., Endoh, M., Enomoto, H., Eslami, A., Fagiolini, M., Fairbairn, L., Farach-Carson, M. C., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L. M., Fujita, R., Furusawa, J-I., Geijtenbeek, T. B., Gingeras, T., Goldowitz, D., Guhl, S., Guler, R., Gustincich, S., Ha, T. J., Hamaguchi, M., Hara, M., Hasegawa, Y., Herlyn, M., Heutink, P., Hitchens, K. J., Hume, D. A., Ikawa, T., Ishizu, Y., Kai, C., Kawamoto, H., Kawamura, Y. I., Kempfle, J. S., Kenna, T. J., Kere, J., Khachigian, L. M., Kitamura, T., Klein, S., Klinken, S. P., Knox, A. J., Kojima, S., Koseki, H., Koyasu, S., Lee, W., Lennartsson, A., Mackay-Sim, A., Mejhert, N., Mizuno, Y., Morikawa, H., Morimoto, M., Moro, K., Morris, K. J., Motohashi, H., Mummery, C. L., Nakachi, Y., Nakahara, F., Nakamura, T., Nakamura, Y., Nozaki, T., Ogishima, S., Ohkura, N., Ohno, H., Ohshima, M., Okada-Hatakeyama, M., Okazaki, Y., Orlando, V., Ovchinnikov, D. A., Passier, R., Patrikakis, M., Pombo, A., Pradhan-Bhatt, S., Qin, X-Y., Rehli, M., Rizzu, P., Roy, S., Sajantila, A., Sakaguchi, S., Sato, H., Satoh, H., Savvi, S., Saxena, A., Schmidl, C., Schneider, C., Schulze-Tanzil, G. G., Schwegmann, A., Sheng, G., Shin, J. W., Sugiyama, D., Sugiyama, T., Summers, K. M., Takahashi, N., Takai, J., Tanaka, H., Tatsukawa, H., Tomoiu, A., Toyoda, H., van de Wetering, M., van den Berg, L. M., Verardo, R., Vijayan, D., Wells, C. A., Winteringham, L. N., Wolvetang, E., Yamaguchi, Y., Yamamoto, M., Yanagi-Mizuochi, C., Yoneda, M., Yonekura, Y., Zhang, P. G., Zucchelli, S., Abugessaisa, I., Arner, E., Harshbarger, J., Kondo, A., Lassmann, T., Lizio, M., Sahin, S., Sengstag, T., Severin, J., Shimoji, H., Suzuki, M., Suzuki, H., Kawai, J., Kondo, N., Itoh, M., Daub, C. O., Kasukawa, T., Kawaji, H., Carninci, P., Forrest, A. R. R. & Hayashizaki, Y., 29 Aug 2017, In : Scientific Data. 4, 170112.

    Research output: Contribution to journalArticle

  32. Treatable traits and therapeutic targets: goals for systems biology in infectious disease

    Russell, C. & Baillie, J., 27 Apr 2017, In : Current Opinion in Systems Biology. 2, p. 140-146

    Research output: Contribution to journalArticle

  33. Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease

    Baillie, J. K., Arner, E., Daub, C., De Hoon, M., Itoh, M., Kawaji, H., Lassmann, T., Carninci, P., Forrest, A. R. R., Hayashizaki, Y., The FANTOM Consortium, Faulkner, G. J., Wells, C. A., Rehli, M., Pavli, P., Summers, K. M. & Hume, D. A., 6 Mar 2017, In : PLoS Genetics. 13, 3, e1006641.

    Research output: Contribution to journalArticle

  34. Middle East Respiratory Syndrome

    Arabi, Y. M., Balkhy, H. H., Hayden, F. G., Bouchama, A., Luke, T., Baillie, J., Al-Omari, A., Hajeer, A. H., Senga, M., Denison, M. R., Nguyen-Van-Tam, J. S., Shindo, N., Bermingham, A., Chappell, J. D., Van Kerkhove, M. D. & Fowler, R. A., 9 Feb 2017, In : New England Journal of Medicine. 376, p. 584-594 11 p.

    Research output: Contribution to journalArticle

  35. 2016
  36. FANTOM5 web resource for the large-scale genome-wide transcription start site activity profiles of wide-range of mammalian cells

    Kasukawa, T., Lizio, M., Harshbarger, J., Hisashi, S., Severin, J., Imad, A., Sahin, S., Freeman, T. C., Baillie, K., Sandelin, A., Carninci, P., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 26 May 2016, In : Human genomics. 10, Suppt. 1, p. 34 2 p., P42.

    Research output: Contribution to journalMeeting abstract

  37. Microglial brain region−dependent diversity and selective regional sensitivities to aging

    Renault, K., Michoel, T., Karavolos, M., Clohisey, S., Baillie, J., Stevens, M., Freeman, T., Summers, K. & McColl, B., Mar 2016, In : Nature Neuroscience. 19, 3, p. 504-516

    Research output: Contribution to journalArticle

  38. 2015
  39. The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

    Hurst, L. D., Ghanbarian, A. T., Forrest, A. R. R., FANTOM consortium & Huminiecki, L., 18 Dec 2015, In : PLoS Biology. 13, 12, e1002315.

    Research output: Contribution to journalArticle

  40. The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis

    Patarčić, I., Gelemanović, A., Kirin, M., Kolčić, I., Theodoratou, E., Baillie, K. J., de Jong, M. D., Rudan, I., Campbell, H. & Polašek, O., 3 Nov 2015, In : Scientific Reports. 5, p. 16119

    Research output: Contribution to journalArticle

  41. Gene regulation. Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

    Arner, E., Daub, C. O., Vitting-Seerup, K., Andersson, R., Lilje, B., Drabløs, F., Lennartsson, A., Rönnerblad, M., Hrydziuszko, O., Vitezic, M., Freeman, T. C., Alhendi, A. M. N., Arner, P., Axton, R., Baillie, J. K., Beckhouse, A., Bodega, B., Briggs, J., Brombacher, F., Davis, M. & 31 others, Detmar, M., Ehrlund, A., Endoh, M., Eslami, A., Fagiolini, M., Fairbairn, L., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L., Goldowitz, D., Guler, R., Ha, T., Hara, M., Herlyn, M., Ikawa, T., Kai, C., Kawamoto, H., Khachigian, L. M., Klinken, S. P., Kojima, S., Koseki, H., Klein, S., Mejhert, N., Miyaguchi, K., Mizuno, Y., Morimoto, M., Tomoiu, A., Summers, K. M., Hume, D. A. & FANTOM Consortium, 27 Feb 2015, In : Science. 347, 6225, p. 1010-4 5 p.

    Research output: Contribution to journalArticle

  42. Gateways to the FANTOM5 promoter level mammalian expression atlas

    Lizio, M., Harshbarger, J., Shimoji, H., Severin, J., Kasukawa, T., Sahin, S., Abugessaisa, I., Fukuda, S., Hori, F., Ishikawa-Kato, S., Mungall, C. J., Arner, E., Baillie, J. K., Bertin, N., Bono, H., de Hoon, M., Diehl, A. D., Dimont, E., Freeman, T. C., Fujieda, K. & 22 others, Hide, W., Kaliyaperumal, R., Katayama, T., Lassmann, T., Meehan, T. F., Nishikata, K., Ono, H., Rehli, M., Sandelin, A., Schultes, E. A., Hoen, P. A. C., Tatum, Z., Thompson, M., Toyoda, T., Wright, D. W., Daub, C. O., Itoh, M., Carninci, P., Hayashizaki, Y., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 5 Jan 2015, In : Genome Biology. 16, 14 p., 22.

    Research output: Contribution to journalArticle

  43. The Effectiveness of Convalescent Plasma and Hyperimmune Immunoglobulin for the Treatment of Severe Acute Respiratory Infections of Viral Etiology: A Systematic Review and Exploratory Meta-analysis

    Mair-Jenkins, J., Saavedra-Campos, M., Baillie, J. K., Cleary, P., Khaw, F-M., Lim, W. S., Makki, S., Rooney, K. D., Beck, C. R. & Convalescent Plasma Study Group, 1 Jan 2015, In : The Journal of Infectious Diseases. 211, 1, p. 80-90 11 p.

    Research output: Contribution to journalLiterature review

  44. 2014
  45. Antiviral combinations for severe influenza

    Dunning, J., Baillie, J. K., Cao, B., Hayden, F. G. & International Severe Acute Respiratory and Emerging Infection Consortium (ISARIC), Dec 2014, In : The Lancet Infectious Diseases. 14, 12, p. 1259-70 12 p.

    Research output: Contribution to journalArticle

  46. Stratified infection medicine: a call to arms

    Russell, C., Griffiths, S. J., Baillie, J. K. & Haas, J., Jun 2014, In : The Lancet Infectious Diseases. 14, 6, p. 451-451 1 p.

    Research output: Contribution to journalLetter

  47. Translational genomics. Targeting the host immune response to fight infection

    Baillie, J. K., 23 May 2014, In : Science. 344, 6186, p. 807-808 2 p.

    Research output: Contribution to journalEditorial

  48. Transcriptional profiling of the human fibrillin/LTBP gene family, key regulators of mesenchymal cell functions

    Davis, M. R., Andersson, R., Severin, J., De Hoon, M., Bertin, N., Baillie, J. K., Kawaji, H., Sandelin, A., Forrest, A. R. R., Summers, K. M. & Fantom Consortium, 1 May 2014, In : Molecular Genetics and Metabolism. 112, 1, p. 73-83

    Research output: Contribution to journalArticle

  49. A promoter-level mammalian expression atlas

    Forrest, A. R. R., Kawaji, H., Rehli, M., Baillie, J. K., de Hoon, M. J. L., Haberle, V., Lassmann, T., Kulakovskiy, I. V., Lizio, M., Itoh, M., Andersson, R., Mungall, C. J., Meehan, T. F., Schmeier, S., Bertin, N., Jorgensen, M., Dimont, E., Arner, E., Schmidl, C., Schaefer, U. & 32 others, Medvedeva, Y. A., Plessy, C., Vitezic, M., Severin, J., Semple, C. A., Ishizu, Y., Young, R. S., Francescatto, M., Alam, I., Albanese, D., Altschuler, G. M., Arakawa, T., Archer, J. A. C., Arner, P., Babina, M., Rennie, S., Balwierz, P. J., Beckhouse, A. G., Pradhan-Bhatt, S., Blake, J. A., Blumenthal, A., Fisher, M. E., Ha, T. J., Joshi, A., Meynert, A., Prendergast, J. G. D., Summers, K. M., Freeman, T. C., Taylor, M. S., Hume, D. A., FANTOM Consortium & RIKEN PMI CLST DGT, 26 Mar 2014, In : Nature. 507, 7493, p. 462-+ 22 p.

    Research output: Contribution to journalArticle

  50. An atlas of active enhancers across human cell types and tissues

    Andersson, R., Gebhard, C., Miguel-Escalada, I., Hoof, I., Bornholdt, J., Boyd, M., Chen, Y., Zhao, X., Schmidl, C., Suzuki, T., Ntini, E., Arner, E., Valen, E., Li, K., Schwarzfischer, L., Glatz, D., Raithel, J., Lilje, B., Rapin, N., Bagger, F. O. & 31 others, Jørgensen, M., Andersen, P. R., Bertin, N., Rackham, O., Burroughs, A. M., Baillie, J. K., Ishizu, Y., Shimizu, Y., Furuhata, E., Maeda, S., Negishi, Y., Mungall, C. J., Meehan, T. F., Lassmann, T., Itoh, M., Kawaji, H., Kondo, N., Kawai, J., Lennartsson, A., Daub, C. O., Heutink, P., Hume, D. A., Jensen, T. H., Suzuki, H., Hayashizaki, Y., FANTOM Consortium, Young, R. S., Fisher, M. E., Meynert, A., Prendergast, J. G. D. & Taylor, M. S., 26 Mar 2014, In : Nature. 507, 7493, p. 455-61 7 p.

    Research output: Contribution to journalArticle

  51. Network analysis reveals distinct clinical syndromes underlying acute mountain sickness

    Hall, D. P., MacCormick, I. J. C., Phythian-Adams, A. T., Rzechorzek, N. M., Hope-Jones, D., Cosens, S., Jackson, S., Bates, M. G. D., Collier, D. J., Hume, D. A., Freeman, T., Thompson, A. A. R. & Baillie, J. K., 22 Jan 2014, In : PLoS ONE. 9, 1, p. e81229

    Research output: Contribution to journalArticle

  52. Open source clinical science for emerging infections

    Dunning, J. W., Merson, L., Rohde, G. G. U., Gao, Z., Semple, M. G., Tran, D., Gordon, A., Olliaro, P. L., Khoo, S. H., Bruzzone, R., Horby, P., Cobb, J. P., Longuere, K-S., Kellam, P., Nichol, A., Brett, S., Everett, D., Walsh, T. S., Hien, T-T., Yu, H. & 15 others, Zambon, M., Ruiz-Palacios, G., Lang, T., Akhvlediani, T., Hayden, F. G., Marshall, J., Webb, S., Angus, D. C., Shindo, N., van der Werf, S., Openshaw, P. J. M., Farrar, J., Carson, G., Baillie, J. K. & ISARIC Working Group 3, ISARIC Council, Jan 2014, In : The Lancet Infectious Diseases. 14, 1, p. 8-9 2 p.

    Research output: Contribution to journalComment/debate

  53. Heteroresistance at the single-cell level: adapting to antibiotic stress through a population-based strategy and growth-controlled interphenotypic coordination

    Wang, X., Kang, Y., Luo, C., Zhao, T., Liu, L., Jiang, X., Fu, R., An, S., Chen, J., Jiang, N., Ren, L., Wang, Q., Baillie, J. K., Gao, Z. & Yu, J., 2014, In : mBio. 5, 1, p. e00942-13

    Research output: Contribution to journalArticle

  54. 2013
  55. Deciding authorship order

    Brennan, P. M., Jubb, A., Baillie, J. K. & Partridge, R. W., 16 Dec 2013, In : BMJ. 347, 3 p., 7182.

    Research output: Contribution to journalEditorial

  56. An expression atlas of human primary cells: inference of gene function from coexpression networks

    Mabbott, N. A., Baillie, J. K., Brown, H., Freeman, T. C. & Hume, D. A., 20 Sep 2013, In : BMC Genomics. 14, 1, 13 p., 632.

    Research output: Contribution to journalArticle

  57. Modelling mutational and selection pressures on dinucleotides in eukaryotic phyla -selection against CpG and UpA in cytoplasmically expressed RNA and in RNA viruses

    Simmonds, P., Xia, W., Baillie, J. K. & McKinnon, K., 10 Sep 2013, In : BMC Genomics. 14, 1, 16 p., 610.

    Research output: Contribution to journalArticle

  58. An updated systematic review of the role of host genetics in susceptibility to influenza

    Horby, P., Nguyen, N. Y., Dunstan, S. J. & Baillie, J. K., Sep 2013, In : Influenza and other respiratory viruses. 7 Suppl 2, p. 37-41 5 p.

    Research output: Contribution to journalLiterature review

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