Edinburgh Research Explorer

Dr Kenneth Baillie

Snr. Clinical Research Fellow in Anaesthesia & Critical Care

  1. 2019
  2. Host Susceptibility to Severe Influenza A Virus Infection

    Clohisey, S. & Baillie, J., 5 Sep 2019, In : Critical Care.

    Research output: Contribution to journalArticle

  3. Predictive validity of a novel non-invasive estimation of effective shunt fraction in critically ill patients.

    Chang, E. M., Bretherick, A., Drummond, G. B., Baillie, J. & Baillie, J., 20 Aug 2019, In : Intensive care medicine experimental .

    Research output: Contribution to journalArticle

  4. The utility of peripheral blood leucocyte ratios as biomarkers in infectious diseases: a systematic review and meta-analysis

    Russell, C. D., Parajuli, A., Gale, H. J., Bulteel, N. S., Schuetz, P., de Jager, C. P. C., Loonen, A. J. M., Merekoulias, G. I. & Baillie, J., 22 Feb 2019, In : Journal of Infection.

    Research output: Contribution to journalArticle

  5. 2018
  6. The Search for Efficacious New Therapies in Sepsis Needs to Embrace Heterogeneity

    Scicluna, B. P. & Baillie, J. K., 12 Dec 2018, In : American Journal of Respiratory and Critical Care Medicine.

    Research output: Contribution to journalArticle

  7. Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease

    IIBDGC Consortium & FANTOM5 Consortium , 1 Mar 2018, In : PLoS Computational Biology. 14, 3, p. e1005934

    Research output: Contribution to journalArticle

  8. The 2018 Lake Louise Acute Mountain Sickness Score

    Roach, R. C., Hackett, P. H., Oelz, O., Bärtsch, P., Luks, A. M., MacInnis, M. J., Baillie, J. K. & Lake Louise AMS Score Consensus Committee, 1 Mar 2018, In : High Altitude Medicine and Biology. 19, 1, p. 4-6 3 p.

    Research output: Contribution to journalArticle

  9. Thromboelastometry and Platelet Function during Acclimatization to High Altitude

    Rocke, A. S., Paterson, G. G., Barber, M. T., Jackson, A. I. R., Main, S., Stannett, C., Schnopp, M. F., Baillie, J. K., Horne, E. H., Moores, C., Harrison, P., Nimmo, A. F. & Thompson, A. A. R., 5 Jan 2018, In : Thrombosis and haemostasis. 118, 1, p. 63-71 9 p.

    Research output: Contribution to journalArticle

  10. 2017
  11. FANTOM5 CAGE profiles of human and mouse samples

    Noguchi, S., Arakawa, T., Fukuda, S., Furuno, M., Hasegawa, A., Hori, F., Ishikawa-Kato, S., Kaida, K., Kaiho, A., Kanamori-Katayama, M., Kawashima, T., Kojima, M., Kubosaki, A., Manabe, R-I., Murata, M., Nagao-Sato, S., Nakazato, K., Ninomiya, N., Nishiyori-Sueki, H., Noma, S. & 158 othersSaijyo, E., Saka, A., Sakai, M., Simon, C., Suzuki, N., Tagami, M., Watanabe, S., Yoshida, S., Arner, P., Axton, R. A., Babina, M., Baillie, J. K., Barnett, T. C., Beckhouse, A. G., Blumenthal, A., Bodega, B., Bonetti, A., Briggs, J., Brombacher, F., Carlisle, A. J., Clevers, H. C., Davis, C. A., Detmar, M., Dohi, T., Edge, A. S. B., Edinger, M., Ehrlund, A., Ekwall, K., Endoh, M., Enomoto, H., Eslami, A., Fagiolini, M., Fairbairn, L., Farach-Carson, M. C., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L. M., Fujita, R., Furusawa, J-I., Geijtenbeek, T. B., Gingeras, T., Goldowitz, D., Guhl, S., Guler, R., Gustincich, S., Ha, T. J., Hamaguchi, M., Hara, M., Hasegawa, Y., Herlyn, M., Heutink, P., Hitchens, K. J., Hume, D. A., Ikawa, T., Ishizu, Y., Kai, C., Kawamoto, H., Kawamura, Y. I., Kempfle, J. S., Kenna, T. J., Kere, J., Khachigian, L. M., Kitamura, T., Klein, S., Klinken, S. P., Knox, A. J., Kojima, S., Koseki, H., Koyasu, S., Lee, W., Lennartsson, A., Mackay-Sim, A., Mejhert, N., Mizuno, Y., Morikawa, H., Morimoto, M., Moro, K., Morris, K. J., Motohashi, H., Mummery, C. L., Nakachi, Y., Nakahara, F., Nakamura, T., Nakamura, Y., Nozaki, T., Ogishima, S., Ohkura, N., Ohno, H., Ohshima, M., Okada-Hatakeyama, M., Okazaki, Y., Orlando, V., Ovchinnikov, D. A., Passier, R., Patrikakis, M., Pombo, A., Pradhan-Bhatt, S., Qin, X-Y., Rehli, M., Rizzu, P., Roy, S., Sajantila, A., Sakaguchi, S., Sato, H., Satoh, H., Savvi, S., Saxena, A., Schmidl, C., Schneider, C., Schulze-Tanzil, G. G., Schwegmann, A., Sheng, G., Shin, J. W., Sugiyama, D., Sugiyama, T., Summers, K. M., Takahashi, N., Takai, J., Tanaka, H., Tatsukawa, H., Tomoiu, A., Toyoda, H., van de Wetering, M., van den Berg, L. M., Verardo, R., Vijayan, D., Wells, C. A., Winteringham, L. N., Wolvetang, E., Yamaguchi, Y., Yamamoto, M., Yanagi-Mizuochi, C., Yoneda, M., Yonekura, Y., Zhang, P. G., Zucchelli, S., Abugessaisa, I., Arner, E., Harshbarger, J., Kondo, A., Lassmann, T., Lizio, M., Sahin, S., Sengstag, T., Severin, J., Shimoji, H., Suzuki, M., Suzuki, H., Kawai, J., Kondo, N., Itoh, M., Daub, C. O., Kasukawa, T., Kawaji, H., Carninci, P., Forrest, A. R. R. & Hayashizaki, Y., 29 Aug 2017, In : Scientific Data. 4, 170112.

    Research output: Contribution to journalArticle

  12. Treatable traits and therapeutic targets: goals for systems biology in infectious disease

    Russell, C. & Baillie, J., 27 Apr 2017, In : Current Opinion in Systems Biology. 2, p. 140-146

    Research output: Contribution to journalArticle

  13. Analysis of the human monocyte-derived macrophage transcriptome and response to lipopolysaccharide provides new insights into genetic aetiology of inflammatory bowel disease

    Baillie, J., Arner, E., Daub, C., De Hoon, M., Itoh, M., Kawaji, H., Lassmann, T., Carninci, P., Forrest, A. R. R., Hayashizaki, Y., The FANTOM Consortium, Faulkner, G., Wells, C. A., Rehli, M., Pavli, P., Summers, K. & Hume, D., 6 Mar 2017, In : PLoS Genetics. 13, 3, e1006641.

    Research output: Contribution to journalArticle

  14. Middle East Respiratory Syndrome

    Arabi, Y. M., Balkhy, H. H., Hayden, F. G., Bouchama, A., Luke, T., Baillie, J., Al-Omari, A., Hajeer, A. H., Senga, M., Denison, M. R., Nguyen-Van-Tam, J. S., Shindo, N., Bermingham, A., Chappell, J. D., Van Kerkhove, M. D. & Fowler, R. A., 9 Feb 2017, In : The New England Journal of Medicine. 376, p. 584-594 11 p.

    Research output: Contribution to journalArticle

  15. 2016
  16. FANTOM5 web resource for the large-scale genome-wide transcription start site activity profiles of wide-range of mammalian cells

    Kasukawa, T., Lizio, M., Harshbarger, J., Hisashi, S., Severin, J., Imad, A., Sahin, S., Freeman, T. C., Baillie, K., Sandelin, A., Carninci, P., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 26 May 2016, In : Human genomics. 10, Suppt. 1, p. 34 2 p., P42.

    Research output: Contribution to journalMeeting abstract

  17. Microglial brain region−dependent diversity and selective regional sensitivities to aging

    Renault, K., Michoel, T., Karavolos, M., Clohisey, S., Baillie, J., Stevens, M., Freeman, T., Summers, K. & McColl, B., Mar 2016, In : Nature Neuroscience. 19, 3, p. 504-516

    Research output: Contribution to journalArticle

  18. 2015
  19. The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

    Hurst, L. D., Ghanbarian, A. T., Forrest, A. R. R., FANTOM consortium & Huminiecki, L., 18 Dec 2015, In : PLoS Biology. 13, 12, e1002315.

    Research output: Contribution to journalArticle

  20. The role of host genetic factors in respiratory tract infectious diseases: systematic review, meta-analyses and field synopsis

    Patarčić, I., Gelemanović, A., Kirin, M., Kolčić, I., Theodoratou, E., Baillie, K. J., de Jong, M. D., Rudan, I., Campbell, H. & Polašek, O., 3 Nov 2015, In : Scientific Reports. 5, p. 16119

    Research output: Contribution to journalArticle

  21. Gene regulation. Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

    Arner, E., Daub, C. O., Vitting-Seerup, K., Andersson, R., Lilje, B., Drabløs, F., Lennartsson, A., Rönnerblad, M., Hrydziuszko, O., Vitezic, M., Freeman, T. C., Alhendi, A. M. N., Arner, P., Axton, R., Baillie, J. K., Beckhouse, A., Bodega, B., Briggs, J., Brombacher, F., Davis, M. & 31 othersDetmar, M., Ehrlund, A., Endoh, M., Eslami, A., Fagiolini, M., Fairbairn, L., Faulkner, G. J., Ferrai, C., Fisher, M. E., Forrester, L., Goldowitz, D., Guler, R., Ha, T., Hara, M., Herlyn, M., Ikawa, T., Kai, C., Kawamoto, H., Khachigian, L. M., Klinken, S. P., Kojima, S., Koseki, H., Klein, S., Mejhert, N., Miyaguchi, K., Mizuno, Y., Morimoto, M., Tomoiu, A., Summers, K. M., Hume, D. A. & FANTOM Consortium, 27 Feb 2015, In : Science. 347, 6225, p. 1010-4 5 p.

    Research output: Contribution to journalArticle

  22. Gateways to the FANTOM5 promoter level mammalian expression atlas

    Lizio, M., Harshbarger, J., Shimoji, H., Severin, J., Kasukawa, T., Sahin, S., Abugessaisa, I., Fukuda, S., Hori, F., Ishikawa-Kato, S., Mungall, C. J., Arner, E., Baillie, J. K., Bertin, N., Bono, H., de Hoon, M., Diehl, A. D., Dimont, E., Freeman, T. C., Fujieda, K. & 22 othersHide, W., Kaliyaperumal, R., Katayama, T., Lassmann, T., Meehan, T. F., Nishikata, K., Ono, H., Rehli, M., Sandelin, A., Schultes, E. A., Hoen, P. A. C., Tatum, Z., Thompson, M., Toyoda, T., Wright, D. W., Daub, C. O., Itoh, M., Carninci, P., Hayashizaki, Y., Forrest, A. R. R., Kawaji, H. & FANTOM Consortium, 5 Jan 2015, In : Genome Biology. 16, 14 p., 22.

    Research output: Contribution to journalArticle

  23. The Effectiveness of Convalescent Plasma and Hyperimmune Immunoglobulin for the Treatment of Severe Acute Respiratory Infections of Viral Etiology: A Systematic Review and Exploratory Meta-analysis

    Mair-Jenkins, J., Saavedra-Campos, M., Baillie, J. K., Cleary, P., Khaw, F-M., Lim, W. S., Makki, S., Rooney, K. D., Beck, C. R. & Convalescent Plasma Study Group, 1 Jan 2015, In : The Journal of Infectious Diseases. 211, 1, p. 80-90 11 p.

    Research output: Contribution to journalLiterature review

  24. 2014
  25. Antiviral combinations for severe influenza

    Dunning, J., Baillie, J. K., Cao, B., Hayden, F. G. & International Severe Acute Respiratory and Emerging Infection Consortium (ISARIC), Dec 2014, In : The Lancet Infectious Diseases. 14, 12, p. 1259-70 12 p.

    Research output: Contribution to journalArticle

  26. Stratified infection medicine: a call to arms

    Russell, C., Griffiths, S. J., Baillie, J. K. & Haas, J., Jun 2014, In : The Lancet Infectious Diseases. 14, 6, p. 451-451 1 p.

    Research output: Contribution to journalLetter

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