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Axial Confocal Tomography of Capillary-Contained Colloidal Structures

Research output: Contribution to journalArticle

  • Shir R Liber
  • Ganit Indech
  • Ernest B van der Wee
  • Alexander V Butenko
  • Thomas E Kodger
  • Peter J Lu
  • Andrew Schofield
  • David A Weitz
  • Alfons van Blaaderen
  • Eli Sloutskin

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Original languageEnglish
Pages (from-to)13343-13349
Number of pages7
Early online date18 Oct 2017
Publication statusPublished - 21 Nov 2017


Confocal microscopy is widely used for threedimensional (3D) sample reconstructions. Arguably, the most significant challenge in such reconstructions is posed by the resolution along the optical axis being significantly lower than in the lateral directions. In addition, the imaging rate is lower along the optical axis in most confocal architectures, prohibiting reliable 3D reconstruction of dynamic samples. Here, we demonstrate a very simple, cheap, and generic method of multiangle microscopy, allowing high-resolution high-rate confocal slice collection to be carried out with capillary-contained colloidal samples in a wide range of slice orientations. This method, realizable with any common confocal architecture and recently implemented with macroscopic specimens enclosed in rotatable cylindrical capillaries, allows 3D reconstructions of colloidal structures to be verified by direct experiments and provides a solid testing ground for complex reconstruction algorithms. In this paper, we focus on the implementation of this method for dense nonrotatable colloidal samples, contained in complex-shaped capillaries. Additionally, we discuss strategies to minimize potential pitfalls of this method, such as the artificial appearance of chain-like particle structures.

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